Hb_002095_030

Information

Type -
Description -
Location Contig2095: 72732-74074
Sequence    

Annotation

kegg
ID rcu:RCOM_1170120
description hypothetical protein
nr
ID EYU23646.1
description hypothetical protein MIMGU_mgv1a021906mg, partial [Erythranthe guttata]
swissprot
ID -
description -
trembl
ID J3N737
description Uncharacterized protein OS=Oryza brachyantha GN=OB11G16230 PE=4 SV=1
Gene Ontology
ID GO:0016301
description receptor-like protein kinase at4g00960

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002095_030 0.0 - - hypothetical protein MIMGU_mgv1a021906mg, partial [Erythranthe guttata]
2 Hb_000495_050 0.161941293 - - hypothetical protein JCGZ_25174 [Jatropha curcas]
3 Hb_002107_110 0.164144867 - - PREDICTED: probable cinnamyl alcohol dehydrogenase 6 isoform X1 [Jatropha curcas]
4 Hb_004837_200 0.1713181297 - - hypothetical protein POPTR_0001s26450g [Populus trichocarpa]
5 Hb_000359_260 0.1820309064 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 [Jatropha curcas]
6 Hb_014361_170 0.1843958211 transcription factor TF Family: LOB PREDICTED: LOB domain-containing protein 37 [Jatropha curcas]
7 Hb_018633_010 0.1859144974 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
8 Hb_000454_080 0.1865185989 - - PREDICTED: arginine decarboxylase [Jatropha curcas]
9 Hb_086614_010 0.1873088937 transcription factor TF Family: Orphans PREDICTED: zinc finger protein HD1-like isoform X1 [Jatropha curcas]
10 Hb_089114_010 0.1922744747 - - PREDICTED: uncharacterized protein LOC105646926 [Jatropha curcas]
11 Hb_061908_030 0.1925483131 - - PREDICTED: putative disease resistance protein At3g14460 [Jatropha curcas]
12 Hb_000111_240 0.1940816228 - - PREDICTED: glutamate receptor 2.8-like [Elaeis guineensis]
13 Hb_002965_070 0.194586821 - - PREDICTED: extensin [Jatropha curcas]
14 Hb_005375_060 0.1998914758 - - PREDICTED: probably inactive receptor-like protein kinase At2g46850 [Jatropha curcas]
15 Hb_001581_040 0.2001919962 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
16 Hb_005814_010 0.2003663884 - - ATP binding protein, putative [Ricinus communis]
17 Hb_092458_010 0.2017145144 - - calmodulin binding protein, putative [Ricinus communis]
18 Hb_052434_010 0.2043819182 - - PREDICTED: probable leucine-rich repeat receptor-like serine/threonine-protein kinase At3g14840 [Sesamum indicum]
19 Hb_001769_120 0.2047943953 - - PREDICTED: tetratricopeptide repeat protein 7A [Jatropha curcas]
20 Hb_006120_120 0.2080724604 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_002095_030 Hb_002095_030 Hb_000495_050 Hb_000495_050 Hb_002095_030--Hb_000495_050 Hb_002107_110 Hb_002107_110 Hb_002095_030--Hb_002107_110 Hb_004837_200 Hb_004837_200 Hb_002095_030--Hb_004837_200 Hb_000359_260 Hb_000359_260 Hb_002095_030--Hb_000359_260 Hb_014361_170 Hb_014361_170 Hb_002095_030--Hb_014361_170 Hb_018633_010 Hb_018633_010 Hb_002095_030--Hb_018633_010 Hb_005814_010 Hb_005814_010 Hb_000495_050--Hb_005814_010 Hb_000495_050--Hb_002107_110 Hb_000454_080 Hb_000454_080 Hb_000495_050--Hb_000454_080 Hb_005867_030 Hb_005867_030 Hb_000495_050--Hb_005867_030 Hb_000985_140 Hb_000985_140 Hb_000495_050--Hb_000985_140 Hb_002030_180 Hb_002030_180 Hb_000495_050--Hb_002030_180 Hb_003077_060 Hb_003077_060 Hb_002107_110--Hb_003077_060 Hb_002107_110--Hb_000359_260 Hb_092458_010 Hb_092458_010 Hb_002107_110--Hb_092458_010 Hb_001635_230 Hb_001635_230 Hb_002107_110--Hb_001635_230 Hb_002615_010 Hb_002615_010 Hb_002107_110--Hb_002615_010 Hb_003078_070 Hb_003078_070 Hb_004837_200--Hb_003078_070 Hb_000836_420 Hb_000836_420 Hb_004837_200--Hb_000836_420 Hb_189208_060 Hb_189208_060 Hb_004837_200--Hb_189208_060 Hb_001369_670 Hb_001369_670 Hb_004837_200--Hb_001369_670 Hb_000172_410 Hb_000172_410 Hb_004837_200--Hb_000172_410 Hb_001769_120 Hb_001769_120 Hb_004837_200--Hb_001769_120 Hb_000359_260--Hb_001635_230 Hb_017693_040 Hb_017693_040 Hb_000359_260--Hb_017693_040 Hb_154466_010 Hb_154466_010 Hb_000359_260--Hb_154466_010 Hb_077694_010 Hb_077694_010 Hb_000359_260--Hb_077694_010 Hb_002010_020 Hb_002010_020 Hb_000359_260--Hb_002010_020 Hb_001040_060 Hb_001040_060 Hb_014361_170--Hb_001040_060 Hb_001294_040 Hb_001294_040 Hb_014361_170--Hb_001294_040 Hb_001627_010 Hb_001627_010 Hb_014361_170--Hb_001627_010 Hb_011381_070 Hb_011381_070 Hb_014361_170--Hb_011381_070 Hb_132840_020 Hb_132840_020 Hb_014361_170--Hb_132840_020 Hb_000111_390 Hb_000111_390 Hb_014361_170--Hb_000111_390 Hb_000111_240 Hb_000111_240 Hb_018633_010--Hb_000111_240 Hb_140000_010 Hb_140000_010 Hb_018633_010--Hb_140000_010 Hb_086614_010 Hb_086614_010 Hb_018633_010--Hb_086614_010 Hb_001581_040 Hb_001581_040 Hb_018633_010--Hb_001581_040 Hb_005599_020 Hb_005599_020 Hb_018633_010--Hb_005599_020 Hb_018633_010--Hb_077694_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.219533 1.93955 2.75173 0.372154 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0966608 0.0759715 0 0.435433 0.443112

CAGE analysis