Hb_089140_010

Information

Type -
Description -
Location Contig89140: 10196-11145
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_089140_010 0.0 - - -
2 Hb_006907_100 0.2168635501 - - PREDICTED: tropinone reductase-like 3 [Jatropha curcas]
3 Hb_001898_150 0.2280480693 - - PREDICTED: uncharacterized protein LOC105629671 [Jatropha curcas]
4 Hb_000826_060 0.2336502151 - - PREDICTED: uncharacterized protein LOC105629655 [Jatropha curcas]
5 Hb_001711_010 0.2365989762 - - -
6 Hb_003776_040 0.2373797322 - - PREDICTED: RING finger protein 165-like isoform X2 [Populus euphratica]
7 Hb_010913_010 0.2484219885 desease resistance Gene Name: NB-ARC PREDICTED: TMV resistance protein N-like [Jatropha curcas]
8 Hb_005273_020 0.2496746891 - - -
9 Hb_011485_090 0.2504590506 - - -
10 Hb_000045_280 0.2530973065 - - hypothetical protein JCGZ_04076 [Jatropha curcas]
11 Hb_005000_250 0.2548620942 - - PREDICTED: ATP-dependent zinc metalloprotease FTSH 4, mitochondrial [Vitis vinifera]
12 Hb_002631_220 0.2552455998 - - Patellin-4, putative [Ricinus communis]
13 Hb_171718_020 0.2636713079 - - hypothetical protein JCGZ_00274 [Jatropha curcas]
14 Hb_000302_130 0.268066315 - - PREDICTED: trafficking protein particle complex subunit 1 [Jatropha curcas]
15 Hb_003902_060 0.2728325917 - - PREDICTED: seed biotin-containing protein SBP65 [Jatropha curcas]
16 Hb_002272_010 0.2761242507 - - conserved hypothetical protein [Ricinus communis]
17 Hb_003305_030 0.2774353758 - - -
18 Hb_007136_010 0.2780063316 desease resistance Gene Name: UBA PREDICTED: ATPase WRNIP1 [Jatropha curcas]
19 Hb_001235_170 0.280892541 - - PREDICTED: putative glucuronosyltransferase PGSIP8 [Jatropha curcas]
20 Hb_001769_110 0.2824932433 - - PREDICTED: probable metal-nicotianamine transporter YSL7 [Jatropha curcas]

Gene co-expression network

sample Hb_089140_010 Hb_089140_010 Hb_006907_100 Hb_006907_100 Hb_089140_010--Hb_006907_100 Hb_001898_150 Hb_001898_150 Hb_089140_010--Hb_001898_150 Hb_000826_060 Hb_000826_060 Hb_089140_010--Hb_000826_060 Hb_001711_010 Hb_001711_010 Hb_089140_010--Hb_001711_010 Hb_003776_040 Hb_003776_040 Hb_089140_010--Hb_003776_040 Hb_010913_010 Hb_010913_010 Hb_089140_010--Hb_010913_010 Hb_000302_130 Hb_000302_130 Hb_006907_100--Hb_000302_130 Hb_000743_030 Hb_000743_030 Hb_006907_100--Hb_000743_030 Hb_005000_250 Hb_005000_250 Hb_006907_100--Hb_005000_250 Hb_000122_050 Hb_000122_050 Hb_006907_100--Hb_000122_050 Hb_155541_010 Hb_155541_010 Hb_006907_100--Hb_155541_010 Hb_005928_050 Hb_005928_050 Hb_006907_100--Hb_005928_050 Hb_000883_170 Hb_000883_170 Hb_001898_150--Hb_000883_170 Hb_000098_150 Hb_000098_150 Hb_001898_150--Hb_000098_150 Hb_002235_390 Hb_002235_390 Hb_001898_150--Hb_002235_390 Hb_015807_030 Hb_015807_030 Hb_001898_150--Hb_015807_030 Hb_001898_150--Hb_001711_010 Hb_001863_160 Hb_001863_160 Hb_001898_150--Hb_001863_160 Hb_002232_280 Hb_002232_280 Hb_000826_060--Hb_002232_280 Hb_000627_100 Hb_000627_100 Hb_000826_060--Hb_000627_100 Hb_008096_040 Hb_008096_040 Hb_000826_060--Hb_008096_040 Hb_079733_010 Hb_079733_010 Hb_000826_060--Hb_079733_010 Hb_001277_190 Hb_001277_190 Hb_000826_060--Hb_001277_190 Hb_000011_050 Hb_000011_050 Hb_001711_010--Hb_000011_050 Hb_004899_330 Hb_004899_330 Hb_001711_010--Hb_004899_330 Hb_011915_040 Hb_011915_040 Hb_001711_010--Hb_011915_040 Hb_171718_020 Hb_171718_020 Hb_001711_010--Hb_171718_020 Hb_003305_030 Hb_003305_030 Hb_001711_010--Hb_003305_030 Hb_003147_070 Hb_003147_070 Hb_003776_040--Hb_003147_070 Hb_031822_010 Hb_031822_010 Hb_003776_040--Hb_031822_010 Hb_000445_100 Hb_000445_100 Hb_003776_040--Hb_000445_100 Hb_001769_110 Hb_001769_110 Hb_003776_040--Hb_001769_110 Hb_000421_230 Hb_000421_230 Hb_003776_040--Hb_000421_230 Hb_080362_010 Hb_080362_010 Hb_003776_040--Hb_080362_010 Hb_010913_010--Hb_155541_010 Hb_010913_010--Hb_006907_100 Hb_000099_230 Hb_000099_230 Hb_010913_010--Hb_000099_230 Hb_011485_090 Hb_011485_090 Hb_010913_010--Hb_011485_090 Hb_004846_100 Hb_004846_100 Hb_010913_010--Hb_004846_100 Hb_118228_010 Hb_118228_010 Hb_010913_010--Hb_118228_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.340713 0.486903 0.550826 0.40321 0.106827 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.265807 0.313235 0 0.130144 0

CAGE analysis