Hb_008096_040

Information

Type -
Description -
Location Contig8096: 16090-18639
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa001351mg
description hypothetical protein
nr
ID XP_007214931.1
description hypothetical protein PRUPE_ppa001351mg [Prunus persica]
swissprot
ID Q8VZG8
description Probable LRR receptor-like serine/threonine-protein kinase At4g08850 OS=Arabidopsis thaliana GN=At4g08850 PE=2 SV=3
trembl
ID M5XAQ1
description Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa001351mg PE=4 SV=1
Gene Ontology
ID GO:0016301
description probable lrr receptor-like serine threonine-protein kinase at4g08850

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_008096_040 0.0 - - hypothetical protein PRUPE_ppa001351mg [Prunus persica]
2 Hb_000826_060 0.2527971522 - - PREDICTED: uncharacterized protein LOC105629655 [Jatropha curcas]
3 Hb_002272_010 0.2533673717 - - conserved hypothetical protein [Ricinus communis]
4 Hb_076038_010 0.2561335967 - - conserved hypothetical protein [Ricinus communis]
5 Hb_010913_010 0.2591127136 desease resistance Gene Name: NB-ARC PREDICTED: TMV resistance protein N-like [Jatropha curcas]
6 Hb_007181_040 0.2637227211 - - -
7 Hb_003225_030 0.2748188744 - - Pectinesterase-4 precursor, putative [Ricinus communis]
8 Hb_089140_010 0.3023539252 - - -
9 Hb_001277_160 0.3063326329 - - hypothetical protein MIMGU_mgv1a019742mg, partial [Erythranthe guttata]
10 Hb_001341_110 0.3079896932 - - PREDICTED: vicilin-like antimicrobial peptides 2-2 [Jatropha curcas]
11 Hb_006120_110 0.308255996 - - conserved hypothetical protein [Ricinus communis]
12 Hb_029243_010 0.310194693 - - PREDICTED: protein LURP-one-related 15-like isoform X1 [Jatropha curcas]
13 Hb_155541_010 0.3129919432 - - -
14 Hb_118228_010 0.3184140191 - - PREDICTED: pirin-like protein [Jatropha curcas]
15 Hb_012008_010 0.3241995691 - - -
16 Hb_148891_010 0.3254181557 - - -
17 Hb_001277_190 0.3279610841 - - hypothetical protein CICLE_v10005534mg [Citrus clementina]
18 Hb_000302_130 0.335522113 - - PREDICTED: trafficking protein particle complex subunit 1 [Jatropha curcas]
19 Hb_009976_010 0.3373625235 - - PREDICTED: uncharacterized protein LOC105630216 [Jatropha curcas]
20 Hb_100105_010 0.3394492124 - - PREDICTED: ras-related protein RABF1 [Jatropha curcas]

Gene co-expression network

sample Hb_008096_040 Hb_008096_040 Hb_000826_060 Hb_000826_060 Hb_008096_040--Hb_000826_060 Hb_002272_010 Hb_002272_010 Hb_008096_040--Hb_002272_010 Hb_076038_010 Hb_076038_010 Hb_008096_040--Hb_076038_010 Hb_010913_010 Hb_010913_010 Hb_008096_040--Hb_010913_010 Hb_007181_040 Hb_007181_040 Hb_008096_040--Hb_007181_040 Hb_003225_030 Hb_003225_030 Hb_008096_040--Hb_003225_030 Hb_002232_280 Hb_002232_280 Hb_000826_060--Hb_002232_280 Hb_089140_010 Hb_089140_010 Hb_000826_060--Hb_089140_010 Hb_000627_100 Hb_000627_100 Hb_000826_060--Hb_000627_100 Hb_079733_010 Hb_079733_010 Hb_000826_060--Hb_079733_010 Hb_001277_190 Hb_001277_190 Hb_000826_060--Hb_001277_190 Hb_006096_010 Hb_006096_010 Hb_002272_010--Hb_006096_010 Hb_000486_070 Hb_000486_070 Hb_002272_010--Hb_000486_070 Hb_009233_030 Hb_009233_030 Hb_002272_010--Hb_009233_030 Hb_000256_130 Hb_000256_130 Hb_002272_010--Hb_000256_130 Hb_002272_010--Hb_003225_030 Hb_000649_240 Hb_000649_240 Hb_002272_010--Hb_000649_240 Hb_000243_020 Hb_000243_020 Hb_076038_010--Hb_000243_020 Hb_001277_160 Hb_001277_160 Hb_076038_010--Hb_001277_160 Hb_100105_010 Hb_100105_010 Hb_076038_010--Hb_100105_010 Hb_076038_010--Hb_001277_190 Hb_001449_060 Hb_001449_060 Hb_076038_010--Hb_001449_060 Hb_075230_010 Hb_075230_010 Hb_076038_010--Hb_075230_010 Hb_155541_010 Hb_155541_010 Hb_010913_010--Hb_155541_010 Hb_006907_100 Hb_006907_100 Hb_010913_010--Hb_006907_100 Hb_000099_230 Hb_000099_230 Hb_010913_010--Hb_000099_230 Hb_011485_090 Hb_011485_090 Hb_010913_010--Hb_011485_090 Hb_004846_100 Hb_004846_100 Hb_010913_010--Hb_004846_100 Hb_118228_010 Hb_118228_010 Hb_010913_010--Hb_118228_010 Hb_007101_010 Hb_007101_010 Hb_007181_040--Hb_007101_010 Hb_006120_110 Hb_006120_110 Hb_007181_040--Hb_006120_110 Hb_001195_080 Hb_001195_080 Hb_007181_040--Hb_001195_080 Hb_007181_040--Hb_000826_060 Hb_000538_150 Hb_000538_150 Hb_007181_040--Hb_000538_150 Hb_148891_010 Hb_148891_010 Hb_003225_030--Hb_148891_010 Hb_000861_010 Hb_000861_010 Hb_003225_030--Hb_000861_010 Hb_133311_010 Hb_133311_010 Hb_003225_030--Hb_133311_010 Hb_000612_040 Hb_000612_040 Hb_003225_030--Hb_000612_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0869239 0.103713 0.0184113 0.0625845 0.0112896 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0823151 0.0431755 0 0 0

CAGE analysis