Hb_000861_010

Information

Type -
Description -
Location Contig861: 3127-3405
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID GO:0005739
description conserved hypothetical protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000861_010 0.0 - - -
2 Hb_000088_210 0.2397105324 - - hypothetical protein POPTR_0013s11310g [Populus trichocarpa]
3 Hb_001519_070 0.268335366 - - hypothetical protein JCGZ_09841 [Jatropha curcas]
4 Hb_003225_030 0.2818488057 - - Pectinesterase-4 precursor, putative [Ricinus communis]
5 Hb_000516_070 0.31202596 - - -
6 Hb_018599_010 0.3175532499 - - PREDICTED: uncharacterized protein LOC105640954 [Jatropha curcas]
7 Hb_011689_130 0.3316091842 - - PREDICTED: receptor-like cytosolic serine/threonine-protein kinase RBK2 isoform X1 [Jatropha curcas]
8 Hb_004522_020 0.3362920785 - - PREDICTED: uncharacterized protein LOC105646836 [Jatropha curcas]
9 Hb_000696_020 0.3465531206 - - hypothetical protein JCGZ_25344 [Jatropha curcas]
10 Hb_007778_020 0.3482655264 - - -
11 Hb_003680_110 0.3531769329 - - zinc finger protein, putative [Ricinus communis]
12 Hb_000627_100 0.3539627684 - - -
13 Hb_115326_010 0.3572434473 - - -
14 Hb_025669_030 0.3595354645 - - PREDICTED: uncharacterized protein LOC105649301 [Jatropha curcas]
15 Hb_003902_060 0.3627099791 - - PREDICTED: seed biotin-containing protein SBP65 [Jatropha curcas]
16 Hb_001301_240 0.3631886114 - - -
17 Hb_005511_170 0.3684246709 - - hypothetical protein CISIN_1g030718mg [Citrus sinensis]
18 Hb_001277_160 0.3696985749 - - hypothetical protein MIMGU_mgv1a019742mg, partial [Erythranthe guttata]
19 Hb_148891_010 0.3710826359 - - -
20 Hb_089140_010 0.3750689274 - - -

Gene co-expression network

sample Hb_000861_010 Hb_000861_010 Hb_000088_210 Hb_000088_210 Hb_000861_010--Hb_000088_210 Hb_001519_070 Hb_001519_070 Hb_000861_010--Hb_001519_070 Hb_003225_030 Hb_003225_030 Hb_000861_010--Hb_003225_030 Hb_000516_070 Hb_000516_070 Hb_000861_010--Hb_000516_070 Hb_018599_010 Hb_018599_010 Hb_000861_010--Hb_018599_010 Hb_011689_130 Hb_011689_130 Hb_000861_010--Hb_011689_130 Hb_000088_210--Hb_001519_070 Hb_001427_140 Hb_001427_140 Hb_000088_210--Hb_001427_140 Hb_173902_040 Hb_173902_040 Hb_000088_210--Hb_173902_040 Hb_127008_010 Hb_127008_010 Hb_000088_210--Hb_127008_010 Hb_000099_230 Hb_000099_230 Hb_000088_210--Hb_000099_230 Hb_115326_010 Hb_115326_010 Hb_001519_070--Hb_115326_010 Hb_001519_070--Hb_001427_140 Hb_001519_070--Hb_173902_040 Hb_167364_020 Hb_167364_020 Hb_001519_070--Hb_167364_020 Hb_002272_010 Hb_002272_010 Hb_003225_030--Hb_002272_010 Hb_148891_010 Hb_148891_010 Hb_003225_030--Hb_148891_010 Hb_008096_040 Hb_008096_040 Hb_003225_030--Hb_008096_040 Hb_133311_010 Hb_133311_010 Hb_003225_030--Hb_133311_010 Hb_000612_040 Hb_000612_040 Hb_003225_030--Hb_000612_040 Hb_000696_020 Hb_000696_020 Hb_000516_070--Hb_000696_020 Hb_004522_020 Hb_004522_020 Hb_000516_070--Hb_004522_020 Hb_002631_220 Hb_002631_220 Hb_000516_070--Hb_002631_220 Hb_000516_070--Hb_167364_020 Hb_000832_330 Hb_000832_330 Hb_000516_070--Hb_000832_330 Hb_000710_010 Hb_000710_010 Hb_018599_010--Hb_000710_010 Hb_031403_020 Hb_031403_020 Hb_018599_010--Hb_031403_020 Hb_007778_020 Hb_007778_020 Hb_018599_010--Hb_007778_020 Hb_014720_170 Hb_014720_170 Hb_018599_010--Hb_014720_170 Hb_001427_050 Hb_001427_050 Hb_018599_010--Hb_001427_050 Hb_002374_280 Hb_002374_280 Hb_018599_010--Hb_002374_280 Hb_010913_010 Hb_010913_010 Hb_011689_130--Hb_010913_010 Hb_011689_130--Hb_148891_010 Hb_003322_010 Hb_003322_010 Hb_011689_130--Hb_003322_010 Hb_003776_040 Hb_003776_040 Hb_011689_130--Hb_003776_040 Hb_002175_040 Hb_002175_040 Hb_011689_130--Hb_002175_040 Hb_004102_030 Hb_004102_030 Hb_011689_130--Hb_004102_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.28219 0.559348 1.05466 0 0.183949 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.453043 1.07286 0 0 0

CAGE analysis