Hb_011689_130

Information

Type -
Description -
Location Contig11689: 94826-97216
Sequence    

Annotation

kegg
ID pmum:103322896
description receptor-like cytosolic serine/threonine-protein kinase RBK2
nr
ID XP_012069452.1
description PREDICTED: receptor-like cytosolic serine/threonine-protein kinase RBK2 isoform X1 [Jatropha curcas]
swissprot
ID Q8RXC8
description Receptor-like cytosolic serine/threonine-protein kinase RBK2 OS=Arabidopsis thaliana GN=RBK2 PE=1 SV=1
trembl
ID A0A067L6C5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02053 PE=3 SV=1
Gene Ontology
ID GO:0000166
description receptor-like cytosolic serine threonine-protein kinase rbk2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_011689_130 0.0 - - PREDICTED: receptor-like cytosolic serine/threonine-protein kinase RBK2 isoform X1 [Jatropha curcas]
2 Hb_010913_010 0.2487744227 desease resistance Gene Name: NB-ARC PREDICTED: TMV resistance protein N-like [Jatropha curcas]
3 Hb_148891_010 0.2660125673 - - -
4 Hb_003322_010 0.2887585402 - - PREDICTED: TMV resistance protein N-like isoform X1 [Jatropha curcas]
5 Hb_003776_040 0.290258979 - - PREDICTED: RING finger protein 165-like isoform X2 [Populus euphratica]
6 Hb_002175_040 0.2943296136 - - PREDICTED: myb family transcription factor APL-like [Jatropha curcas]
7 Hb_004102_030 0.2983714188 desease resistance Gene Name: NB-ARC PREDICTED: probable disease resistance protein At5g63020 [Jatropha curcas]
8 Hb_089140_010 0.3007228999 - - -
9 Hb_000803_040 0.3059187454 - - -
10 Hb_006907_100 0.3079390939 - - PREDICTED: tropinone reductase-like 3 [Jatropha curcas]
11 Hb_010578_010 0.3079871637 transcription factor TF Family: bZIP PREDICTED: light-inducible protein CPRF2 [Jatropha curcas]
12 Hb_012379_010 0.3085935459 - - -
13 Hb_001301_240 0.314657011 - - -
14 Hb_127194_010 0.315955295 rubber biosynthesis Gene Name: Mevalonate kinase mevalonate kinase [Hevea brasiliensis]
15 Hb_003225_030 0.3164211961 - - Pectinesterase-4 precursor, putative [Ricinus communis]
16 Hb_002631_090 0.3218393577 - - -
17 Hb_000445_190 0.3219545685 - - -
18 Hb_000088_210 0.3251544148 - - hypothetical protein POPTR_0013s11310g [Populus trichocarpa]
19 Hb_001377_400 0.3290006533 - - neutral/alkaline invertase [Manihot esculenta]
20 Hb_001799_110 0.3293180954 - - PREDICTED: glycine--tRNA ligase 2, chloroplastic/mitochondrial isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_011689_130 Hb_011689_130 Hb_010913_010 Hb_010913_010 Hb_011689_130--Hb_010913_010 Hb_148891_010 Hb_148891_010 Hb_011689_130--Hb_148891_010 Hb_003322_010 Hb_003322_010 Hb_011689_130--Hb_003322_010 Hb_003776_040 Hb_003776_040 Hb_011689_130--Hb_003776_040 Hb_002175_040 Hb_002175_040 Hb_011689_130--Hb_002175_040 Hb_004102_030 Hb_004102_030 Hb_011689_130--Hb_004102_030 Hb_155541_010 Hb_155541_010 Hb_010913_010--Hb_155541_010 Hb_006907_100 Hb_006907_100 Hb_010913_010--Hb_006907_100 Hb_000099_230 Hb_000099_230 Hb_010913_010--Hb_000099_230 Hb_011485_090 Hb_011485_090 Hb_010913_010--Hb_011485_090 Hb_004846_100 Hb_004846_100 Hb_010913_010--Hb_004846_100 Hb_118228_010 Hb_118228_010 Hb_010913_010--Hb_118228_010 Hb_000445_190 Hb_000445_190 Hb_148891_010--Hb_000445_190 Hb_148891_010--Hb_004102_030 Hb_001017_080 Hb_001017_080 Hb_148891_010--Hb_001017_080 Hb_004931_010 Hb_004931_010 Hb_148891_010--Hb_004931_010 Hb_000803_040 Hb_000803_040 Hb_148891_010--Hb_000803_040 Hb_001495_060 Hb_001495_060 Hb_148891_010--Hb_001495_060 Hb_003322_010--Hb_004931_010 Hb_001221_560 Hb_001221_560 Hb_003322_010--Hb_001221_560 Hb_003020_080 Hb_003020_080 Hb_003322_010--Hb_003020_080 Hb_000098_290 Hb_000098_290 Hb_003322_010--Hb_000098_290 Hb_003322_010--Hb_000803_040 Hb_001377_400 Hb_001377_400 Hb_003322_010--Hb_001377_400 Hb_003147_070 Hb_003147_070 Hb_003776_040--Hb_003147_070 Hb_031822_010 Hb_031822_010 Hb_003776_040--Hb_031822_010 Hb_000445_100 Hb_000445_100 Hb_003776_040--Hb_000445_100 Hb_001769_110 Hb_001769_110 Hb_003776_040--Hb_001769_110 Hb_000421_230 Hb_000421_230 Hb_003776_040--Hb_000421_230 Hb_080362_010 Hb_080362_010 Hb_003776_040--Hb_080362_010 Hb_000705_300 Hb_000705_300 Hb_002175_040--Hb_000705_300 Hb_001366_080 Hb_001366_080 Hb_002175_040--Hb_001366_080 Hb_002175_040--Hb_010913_010 Hb_002175_040--Hb_148891_010 Hb_000445_330 Hb_000445_330 Hb_002175_040--Hb_000445_330 Hb_009976_010 Hb_009976_010 Hb_004102_030--Hb_009976_010 Hb_000612_040 Hb_000612_040 Hb_004102_030--Hb_000612_040 Hb_084889_010 Hb_084889_010 Hb_004102_030--Hb_084889_010 Hb_032974_010 Hb_032974_010 Hb_004102_030--Hb_032974_010 Hb_000275_130 Hb_000275_130 Hb_004102_030--Hb_000275_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0132544 0.043876 0.0618666 0.0104983 0.0132795 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0603729 0.0474977 0 0 0

CAGE analysis