Hb_084889_010

Information

Type -
Description -
Location Contig84889: 337-951
Sequence    

Annotation

kegg
ID pop:POPTR_0002s08570g
description POPTRDRAFT_848776; hypothetical protein
nr
ID XP_012078212.1
description PREDICTED: uncharacterized protein LOC105638918 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KLW5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12076 PE=4 SV=1
Gene Ontology
ID GO:0010207
description PREDICTED: uncharacterized protein LOC105638918

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_084889_010 0.0 - - PREDICTED: uncharacterized protein LOC105638918 [Jatropha curcas]
2 Hb_000179_150 0.1828923514 - - hypothetical protein ZEAMMB73_153699 [Zea mays]
3 Hb_109578_010 0.2219457649 - - conserved hypothetical protein [Ricinus communis]
4 Hb_032974_010 0.2235776845 - - -
5 Hb_004102_030 0.2317810234 desease resistance Gene Name: NB-ARC PREDICTED: probable disease resistance protein At5g63020 [Jatropha curcas]
6 Hb_000975_270 0.2365779692 - - PREDICTED: histone H2B.11-like [Phoenix dactylifera]
7 Hb_001017_080 0.2544254062 - - hypothetical protein POPTR_0010s06020g [Populus trichocarpa]
8 Hb_000275_010 0.2555902573 - - -
9 Hb_011242_030 0.2601670562 - - -
10 Hb_000175_580 0.2639012887 transcription factor, desease resistance TF Family: C3H, Gene Name: zf-CCCH hypothetical protein POPTR_0013s00890g [Populus trichocarpa]
11 Hb_000713_020 0.2671708319 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
12 Hb_133311_010 0.2691763481 - - PREDICTED: U-box domain-containing protein 62-like isoform X1 [Glycine max]
13 Hb_000282_140 0.2719878116 - - hypothetical protein JCGZ_07670 [Jatropha curcas]
14 Hb_003992_110 0.2760628049 - - hypothetical protein VITISV_016971 [Vitis vinifera]
15 Hb_002768_020 0.2843159927 transcription factor TF Family: MYB hypothetical protein JCGZ_00902 [Jatropha curcas]
16 Hb_005222_020 0.2843336506 - - hypothetical protein [Beta vulgaris subsp. vulgaris]
17 Hb_005714_050 0.2895049731 transcription factor TF Family: B3 hypothetical protein POPTR_1461s00200g [Populus trichocarpa]
18 Hb_001427_140 0.2897475274 - - PREDICTED: probable phospholipase A2 homolog 1 [Jatropha curcas]
19 Hb_069022_010 0.2916267539 - - conserved hypothetical protein [Ricinus communis]
20 Hb_148891_010 0.2922328302 - - -

Gene co-expression network

sample Hb_084889_010 Hb_084889_010 Hb_000179_150 Hb_000179_150 Hb_084889_010--Hb_000179_150 Hb_109578_010 Hb_109578_010 Hb_084889_010--Hb_109578_010 Hb_032974_010 Hb_032974_010 Hb_084889_010--Hb_032974_010 Hb_004102_030 Hb_004102_030 Hb_084889_010--Hb_004102_030 Hb_000975_270 Hb_000975_270 Hb_084889_010--Hb_000975_270 Hb_001017_080 Hb_001017_080 Hb_084889_010--Hb_001017_080 Hb_133311_010 Hb_133311_010 Hb_000179_150--Hb_133311_010 Hb_000179_150--Hb_109578_010 Hb_009139_010 Hb_009139_010 Hb_000179_150--Hb_009139_010 Hb_000713_020 Hb_000713_020 Hb_000179_150--Hb_000713_020 Hb_001495_060 Hb_001495_060 Hb_000179_150--Hb_001495_060 Hb_005199_010 Hb_005199_010 Hb_109578_010--Hb_005199_010 Hb_000275_010 Hb_000275_010 Hb_109578_010--Hb_000275_010 Hb_004048_010 Hb_004048_010 Hb_109578_010--Hb_004048_010 Hb_109578_010--Hb_001017_080 Hb_032974_010--Hb_000975_270 Hb_005714_050 Hb_005714_050 Hb_032974_010--Hb_005714_050 Hb_069022_010 Hb_069022_010 Hb_032974_010--Hb_069022_010 Hb_032974_010--Hb_001017_080 Hb_000111_230 Hb_000111_230 Hb_032974_010--Hb_000111_230 Hb_009976_010 Hb_009976_010 Hb_004102_030--Hb_009976_010 Hb_000612_040 Hb_000612_040 Hb_004102_030--Hb_000612_040 Hb_004102_030--Hb_032974_010 Hb_000275_130 Hb_000275_130 Hb_004102_030--Hb_000275_130 Hb_148891_010 Hb_148891_010 Hb_004102_030--Hb_148891_010 Hb_000975_270--Hb_005714_050 Hb_186158_010 Hb_186158_010 Hb_000975_270--Hb_186158_010 Hb_011224_040 Hb_011224_040 Hb_000975_270--Hb_011224_040 Hb_000046_200 Hb_000046_200 Hb_000975_270--Hb_000046_200 Hb_000975_270--Hb_069022_010 Hb_000025_440 Hb_000025_440 Hb_001017_080--Hb_000025_440 Hb_156503_040 Hb_156503_040 Hb_001017_080--Hb_156503_040 Hb_000500_210 Hb_000500_210 Hb_001017_080--Hb_000500_210 Hb_004931_010 Hb_004931_010 Hb_001017_080--Hb_004931_010 Hb_001017_080--Hb_000975_270
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.72705 2.95242 2.95688 1.3962 0 0.727396
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
16.7527 15.5177 0 0 0

CAGE analysis