Hb_031822_010

Information

Type -
Description -
Location Contig31822: 3679-4384
Sequence    

Annotation

kegg
ID cmo:103496015
description uncharacterized LOC103496015
nr
ID XP_008455953.1
description PREDICTED: uncharacterized protein LOC103496015 [Cucumis melo]
swissprot
ID -
description -
trembl
ID A0A0A0LQ97
description Uncharacterized protein OS=Cucumis sativus GN=Csa_2G408940 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_33591: 3679-4417
cDNA
(Sanger)
(ID:Location)		 017_J22.ab1: 3747-4417

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_031822_010 0.0 - - PREDICTED: uncharacterized protein LOC103496015 [Cucumis melo]
2 Hb_000072_190 0.1224915755 - - putative S-adenosylmethionine decarboxylase [Prunus dulcis]
3 Hb_003147_070 0.1230280044 transcription factor TF Family: NAC PREDICTED: transcription factor JUNGBRUNNEN 1-like [Jatropha curcas]
4 Hb_000046_310 0.1481664749 - - PREDICTED: inactive beta-amylase 9 [Jatropha curcas]
5 Hb_004994_250 0.1504293052 transcription factor TF Family: MYB PREDICTED: transcription repressor MYB6 [Jatropha curcas]
6 Hb_018790_050 0.1521157253 - - hypothetical protein CICLE_v10017858mg [Citrus clementina]
7 Hb_013358_020 0.1532669998 - - ccr4-associated factor, putative [Ricinus communis]
8 Hb_089140_110 0.1564528721 - - PREDICTED: uncharacterized protein At1g04910 isoform X1 [Jatropha curcas]
9 Hb_003633_100 0.1566781977 - - hypoia-responsive family protein 1 [Hevea brasiliensis]
10 Hb_006018_050 0.1600234354 - - PREDICTED: probable protein phosphatase 2C 63 [Jatropha curcas]
11 Hb_000003_240 0.1603492848 - - conserved hypothetical protein [Ricinus communis]
12 Hb_080362_010 0.162883748 - - hypothetical protein JCGZ_14167 [Jatropha curcas]
13 Hb_005701_110 0.1629705022 - - PREDICTED: probable 1-acylglycerol-3-phosphate O-acyltransferase [Jatropha curcas]
14 Hb_004117_170 0.1693295345 - - PREDICTED: probable receptor-like protein kinase At3g55450 [Jatropha curcas]
15 Hb_084849_010 0.171211418 - - conserved hypothetical protein [Ricinus communis]
16 Hb_000749_070 0.1734455518 - - PREDICTED: E3 ubiquitin-protein ligase RMA3-like [Jatropha curcas]
17 Hb_007253_010 0.1772330794 - - syntaxin, putative [Ricinus communis]
18 Hb_002217_190 0.1788208175 - - invertase [Hevea brasiliensis]
19 Hb_128486_010 0.1806781424 - - PREDICTED: U-box domain-containing protein 28 [Jatropha curcas]
20 Hb_003776_040 0.1808716314 - - PREDICTED: RING finger protein 165-like isoform X2 [Populus euphratica]

Gene co-expression network

sample Hb_031822_010 Hb_031822_010 Hb_000072_190 Hb_000072_190 Hb_031822_010--Hb_000072_190 Hb_003147_070 Hb_003147_070 Hb_031822_010--Hb_003147_070 Hb_000046_310 Hb_000046_310 Hb_031822_010--Hb_000046_310 Hb_004994_250 Hb_004994_250 Hb_031822_010--Hb_004994_250 Hb_018790_050 Hb_018790_050 Hb_031822_010--Hb_018790_050 Hb_013358_020 Hb_013358_020 Hb_031822_010--Hb_013358_020 Hb_000072_190--Hb_013358_020 Hb_084849_010 Hb_084849_010 Hb_000072_190--Hb_084849_010 Hb_000749_070 Hb_000749_070 Hb_000072_190--Hb_000749_070 Hb_006018_050 Hb_006018_050 Hb_000072_190--Hb_006018_050 Hb_004631_200 Hb_004631_200 Hb_000072_190--Hb_004631_200 Hb_012545_030 Hb_012545_030 Hb_003147_070--Hb_012545_030 Hb_080362_010 Hb_080362_010 Hb_003147_070--Hb_080362_010 Hb_000421_230 Hb_000421_230 Hb_003147_070--Hb_000421_230 Hb_000510_230 Hb_000510_230 Hb_003147_070--Hb_000510_230 Hb_004125_060 Hb_004125_060 Hb_003147_070--Hb_004125_060 Hb_000818_120 Hb_000818_120 Hb_000046_310--Hb_000818_120 Hb_001863_160 Hb_001863_160 Hb_000046_310--Hb_001863_160 Hb_000046_310--Hb_018790_050 Hb_001155_050 Hb_001155_050 Hb_000046_310--Hb_001155_050 Hb_000046_310--Hb_080362_010 Hb_007741_130 Hb_007741_130 Hb_000046_310--Hb_007741_130 Hb_004994_250--Hb_004631_200 Hb_004994_250--Hb_000072_190 Hb_001769_110 Hb_001769_110 Hb_004994_250--Hb_001769_110 Hb_000003_240 Hb_000003_240 Hb_004994_250--Hb_000003_240 Hb_004994_250--Hb_013358_020 Hb_018790_050--Hb_013358_020 Hb_004117_170 Hb_004117_170 Hb_018790_050--Hb_004117_170 Hb_001898_130 Hb_001898_130 Hb_018790_050--Hb_001898_130 Hb_056196_060 Hb_056196_060 Hb_018790_050--Hb_056196_060 Hb_000035_050 Hb_000035_050 Hb_018790_050--Hb_000035_050 Hb_007253_010 Hb_007253_010 Hb_018790_050--Hb_007253_010 Hb_013358_020--Hb_000749_070 Hb_013358_020--Hb_000035_050 Hb_013358_020--Hb_007253_010 Hb_013358_020--Hb_004117_170 Hb_013358_020--Hb_084849_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
15.5192 143.272 177.241 113.109 3.20827 3.66966
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
37.553 72.9145 40.2559 16.7297 17.5736

CAGE analysis