Hb_004522_020

Information

Type -
Description -
Location Contig4522: 6362-6751
Sequence    

Annotation

kegg
ID rcu:RCOM_0876650
description hypothetical protein
nr
ID XP_012088162.1
description PREDICTED: uncharacterized protein LOC105646836 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JKA3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25603 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004522_020 0.0 - - PREDICTED: uncharacterized protein LOC105646836 [Jatropha curcas]
2 Hb_000516_070 0.2714290753 - - -
3 Hb_000003_140 0.2921314302 - - hypothetical protein glysoja_047034, partial [Glycine soja]
4 Hb_005743_090 0.3015812322 - - -
5 Hb_001623_310 0.302474178 - - hypothetical protein CISIN_1g042596mg [Citrus sinensis]
6 Hb_167364_020 0.3037043264 - - -
7 Hb_001329_170 0.3080896584 - - Chlorophyll a-b binding protein, chloroplastic [Aegilops tauschii]
8 Hb_025669_030 0.3091346413 - - PREDICTED: uncharacterized protein LOC105649301 [Jatropha curcas]
9 Hb_171062_010 0.3139596903 - - hypothetical protein VITISV_036059 [Vitis vinifera]
10 Hb_004524_070 0.3140031487 - - PREDICTED: uncharacterized protein LOC105634656 [Jatropha curcas]
11 Hb_005725_200 0.3270848667 transcription factor TF Family: GRF hypothetical protein JCGZ_15989 [Jatropha curcas]
12 Hb_000861_010 0.3362920785 - - -
13 Hb_000866_360 0.3437982703 - - -
14 Hb_003680_110 0.3441658556 - - zinc finger protein, putative [Ricinus communis]
15 Hb_000696_020 0.3480815656 - - hypothetical protein JCGZ_25344 [Jatropha curcas]
16 Hb_003902_060 0.3480960397 - - PREDICTED: seed biotin-containing protein SBP65 [Jatropha curcas]
17 Hb_003768_060 0.3514400368 - - PREDICTED: transcription initiation factor IIB-like [Jatropha curcas]
18 Hb_013016_010 0.3520516714 - - conserved hypothetical protein [Ricinus communis]
19 Hb_000111_410 0.3537726063 - - conserved hypothetical protein [Ricinus communis]
20 Hb_028848_030 0.3550633129 - - -

Gene co-expression network

sample Hb_004522_020 Hb_004522_020 Hb_000516_070 Hb_000516_070 Hb_004522_020--Hb_000516_070 Hb_000003_140 Hb_000003_140 Hb_004522_020--Hb_000003_140 Hb_005743_090 Hb_005743_090 Hb_004522_020--Hb_005743_090 Hb_001623_310 Hb_001623_310 Hb_004522_020--Hb_001623_310 Hb_167364_020 Hb_167364_020 Hb_004522_020--Hb_167364_020 Hb_001329_170 Hb_001329_170 Hb_004522_020--Hb_001329_170 Hb_000696_020 Hb_000696_020 Hb_000516_070--Hb_000696_020 Hb_002631_220 Hb_002631_220 Hb_000516_070--Hb_002631_220 Hb_000516_070--Hb_167364_020 Hb_000861_010 Hb_000861_010 Hb_000516_070--Hb_000861_010 Hb_000832_330 Hb_000832_330 Hb_000516_070--Hb_000832_330 Hb_167508_010 Hb_167508_010 Hb_000003_140--Hb_167508_010 Hb_003605_150 Hb_003605_150 Hb_000003_140--Hb_003605_150 Hb_045481_010 Hb_045481_010 Hb_000003_140--Hb_045481_010 Hb_129459_010 Hb_129459_010 Hb_000003_140--Hb_129459_010 Hb_001269_510 Hb_001269_510 Hb_000003_140--Hb_001269_510 Hb_013016_010 Hb_013016_010 Hb_000003_140--Hb_013016_010 Hb_000866_360 Hb_000866_360 Hb_005743_090--Hb_000866_360 Hb_005743_090--Hb_167364_020 Hb_000189_060 Hb_000189_060 Hb_005743_090--Hb_000189_060 Hb_109358_010 Hb_109358_010 Hb_005743_090--Hb_109358_010 Hb_000111_410 Hb_000111_410 Hb_005743_090--Hb_000111_410 Hb_000513_080 Hb_000513_080 Hb_005743_090--Hb_000513_080 Hb_025669_030 Hb_025669_030 Hb_001623_310--Hb_025669_030 Hb_000392_460 Hb_000392_460 Hb_001623_310--Hb_000392_460 Hb_083822_010 Hb_083822_010 Hb_001623_310--Hb_083822_010 Hb_021346_040 Hb_021346_040 Hb_001623_310--Hb_021346_040 Hb_171062_010 Hb_171062_010 Hb_001623_310--Hb_171062_010 Hb_059481_010 Hb_059481_010 Hb_001623_310--Hb_059481_010 Hb_167364_020--Hb_000513_080 Hb_167364_020--Hb_000866_360 Hb_167364_020--Hb_000189_060 Hb_005048_110 Hb_005048_110 Hb_001329_170--Hb_005048_110 Hb_002321_040 Hb_002321_040 Hb_001329_170--Hb_002321_040 Hb_002397_060 Hb_002397_060 Hb_001329_170--Hb_002397_060 Hb_000111_400 Hb_000111_400 Hb_001329_170--Hb_000111_400 Hb_009620_090 Hb_009620_090 Hb_001329_170--Hb_009620_090 Hb_126648_010 Hb_126648_010 Hb_001329_170--Hb_126648_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.6173 0.249477 1.28427 0 0.172553 0.0805277
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.32883 0 0 0

CAGE analysis