Hb_013016_010

Information

Type -
Description -
Location Contig13016: 1817-5026
Sequence    

Annotation

kegg
ID rcu:RCOM_1429750
description hypothetical protein
nr
ID XP_002512308.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9REY9
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1429750 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_013016_010 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_124951_010 0.1399980713 - - chitinase-like protein [Hevea brasiliensis]
3 Hb_074792_010 0.1447149163 - - PREDICTED: probable lactoylglutathione lyase, chloroplast [Gossypium raimondii]
4 Hb_000317_190 0.1530866995 - - PREDICTED: diacylglycerol kinase 5-like [Jatropha curcas]
5 Hb_000653_020 0.1585170024 - - PREDICTED: protein EARLY RESPONSIVE TO DEHYDRATION 15-like [Jatropha curcas]
6 Hb_002600_130 0.1633552386 - - PREDICTED: uncharacterized protein LOC105646808 [Jatropha curcas]
7 Hb_000189_390 0.1694305456 - - PREDICTED: pollen-specific protein SF21-like isoform X1 [Jatropha curcas]
8 Hb_003430_040 0.1699290077 - - spermidine synthase 1, putative [Ricinus communis]
9 Hb_003529_180 0.1723686226 - - hypothetical protein JCGZ_00222 [Jatropha curcas]
10 Hb_000345_290 0.1727546162 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
11 Hb_000684_100 0.1763156905 - - PREDICTED: cell number regulator 8 [Jatropha curcas]
12 Hb_000347_140 0.178657186 - - PREDICTED: protein FLUORESCENT IN BLUE LIGHT, chloroplastic isoform X2 [Jatropha curcas]
13 Hb_000300_710 0.1802416701 - - PREDICTED: uncharacterized protein LOC105123549 [Populus euphratica]
14 Hb_000424_070 0.1879257618 - - PREDICTED: serine/arginine repetitive matrix protein 2-like [Jatropha curcas]
15 Hb_001214_190 0.1891116244 - - hypothetical protein JCGZ_25001 [Jatropha curcas]
16 Hb_003747_050 0.1903696335 - - PREDICTED: WD repeat-containing protein LWD1 [Jatropha curcas]
17 Hb_000185_230 0.1921030871 - - WD-repeat protein, putative [Ricinus communis]
18 Hb_000732_030 0.1953684699 - - conserved hypothetical protein [Ricinus communis]
19 Hb_004957_020 0.1955766664 - - conserved hypothetical protein [Ricinus communis]
20 Hb_011609_010 0.1961969388 - - PREDICTED: zinc transporter 5 [Jatropha curcas]

Gene co-expression network

sample Hb_013016_010 Hb_013016_010 Hb_124951_010 Hb_124951_010 Hb_013016_010--Hb_124951_010 Hb_074792_010 Hb_074792_010 Hb_013016_010--Hb_074792_010 Hb_000317_190 Hb_000317_190 Hb_013016_010--Hb_000317_190 Hb_000653_020 Hb_000653_020 Hb_013016_010--Hb_000653_020 Hb_002600_130 Hb_002600_130 Hb_013016_010--Hb_002600_130 Hb_000189_390 Hb_000189_390 Hb_013016_010--Hb_000189_390 Hb_124951_010--Hb_002600_130 Hb_124951_010--Hb_000317_190 Hb_000076_100 Hb_000076_100 Hb_124951_010--Hb_000076_100 Hb_163968_010 Hb_163968_010 Hb_124951_010--Hb_163968_010 Hb_001214_190 Hb_001214_190 Hb_124951_010--Hb_001214_190 Hb_000134_030 Hb_000134_030 Hb_124951_010--Hb_000134_030 Hb_003430_040 Hb_003430_040 Hb_074792_010--Hb_003430_040 Hb_000300_710 Hb_000300_710 Hb_074792_010--Hb_000300_710 Hb_000347_140 Hb_000347_140 Hb_074792_010--Hb_000347_140 Hb_000732_030 Hb_000732_030 Hb_074792_010--Hb_000732_030 Hb_000638_260 Hb_000638_260 Hb_074792_010--Hb_000638_260 Hb_003874_010 Hb_003874_010 Hb_074792_010--Hb_003874_010 Hb_005941_020 Hb_005941_020 Hb_000317_190--Hb_005941_020 Hb_047442_010 Hb_047442_010 Hb_000317_190--Hb_047442_010 Hb_001894_160 Hb_001894_160 Hb_000317_190--Hb_001894_160 Hb_011671_110 Hb_011671_110 Hb_000317_190--Hb_011671_110 Hb_015026_020 Hb_015026_020 Hb_000317_190--Hb_015026_020 Hb_000653_020--Hb_074792_010 Hb_000653_020--Hb_000347_140 Hb_028487_120 Hb_028487_120 Hb_000653_020--Hb_028487_120 Hb_044662_050 Hb_044662_050 Hb_000653_020--Hb_044662_050 Hb_004449_140 Hb_004449_140 Hb_000653_020--Hb_004449_140 Hb_003529_180 Hb_003529_180 Hb_002600_130--Hb_003529_180 Hb_003747_050 Hb_003747_050 Hb_002600_130--Hb_003747_050 Hb_000009_220 Hb_000009_220 Hb_002600_130--Hb_000009_220 Hb_011609_010 Hb_011609_010 Hb_002600_130--Hb_011609_010 Hb_004725_030 Hb_004725_030 Hb_002600_130--Hb_004725_030 Hb_076233_030 Hb_076233_030 Hb_000189_390--Hb_076233_030 Hb_014497_030 Hb_014497_030 Hb_000189_390--Hb_014497_030 Hb_000803_090 Hb_000803_090 Hb_000189_390--Hb_000803_090 Hb_000189_390--Hb_011609_010 Hb_000189_390--Hb_003529_180 Hb_000189_390--Hb_124951_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.1372 6.10209 23.8467 1.63258 3.25113 2.01238
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.20767 1.69312 0.682786 2.5094 1.6861

CAGE analysis