Hb_000653_020

Information

Type -
Description -
Location Contig653: 1861-6737
Sequence    

Annotation

kegg
ID cic:CICLE_v10033013mg
description hypothetical protein
nr
ID XP_012091211.1
description PREDICTED: protein EARLY RESPONSIVE TO DEHYDRATION 15-like [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JD11
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03372 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000653_020 0.0 - - PREDICTED: protein EARLY RESPONSIVE TO DEHYDRATION 15-like [Jatropha curcas]
2 Hb_013016_010 0.1585170024 - - conserved hypothetical protein [Ricinus communis]
3 Hb_074792_010 0.1809390653 - - PREDICTED: probable lactoylglutathione lyase, chloroplast [Gossypium raimondii]
4 Hb_000347_140 0.1868249586 - - PREDICTED: protein FLUORESCENT IN BLUE LIGHT, chloroplastic isoform X2 [Jatropha curcas]
5 Hb_028487_120 0.1873739991 - - PREDICTED: HMG-Y-related protein B-like [Jatropha curcas]
6 Hb_044662_050 0.1919532794 - - hypothetical protein POPTR_0002s08440g [Populus trichocarpa]
7 Hb_004449_140 0.1940066273 transcription factor TF Family: MYB PREDICTED: transcription factor GAMYB-like [Jatropha curcas]
8 Hb_000638_260 0.1982281583 - - hypothetical protein JCGZ_06730 [Jatropha curcas]
9 Hb_003430_040 0.1987124653 - - spermidine synthase 1, putative [Ricinus communis]
10 Hb_022092_040 0.2132959455 - - PREDICTED: serine/arginine repetitive matrix protein 1 [Jatropha curcas]
11 Hb_188739_010 0.2225096382 - - protein binding protein, putative [Ricinus communis]
12 Hb_005686_100 0.2238692614 - - conserved hypothetical protein [Ricinus communis]
13 Hb_004586_310 0.2238856298 - - conserved hypothetical protein [Ricinus communis]
14 Hb_002693_040 0.2245943434 - - hypersensitive-induced response protein [Carica papaya]
15 Hb_001279_050 0.2285565294 - - PREDICTED: UPF0392 protein RCOM_0530710 [Jatropha curcas]
16 Hb_000321_080 0.2292699558 - - histone H4 [Zea mays]
17 Hb_124951_010 0.2340498978 - - chitinase-like protein [Hevea brasiliensis]
18 Hb_000345_410 0.2350661378 - - PREDICTED: kinesin-like protein KIFC3 [Jatropha curcas]
19 Hb_000207_140 0.2369279767 - - hypothetical protein POPTR_0019s11310g [Populus trichocarpa]
20 Hb_007545_110 0.2379459169 - - catalytic, putative [Ricinus communis]

Gene co-expression network

sample Hb_000653_020 Hb_000653_020 Hb_013016_010 Hb_013016_010 Hb_000653_020--Hb_013016_010 Hb_074792_010 Hb_074792_010 Hb_000653_020--Hb_074792_010 Hb_000347_140 Hb_000347_140 Hb_000653_020--Hb_000347_140 Hb_028487_120 Hb_028487_120 Hb_000653_020--Hb_028487_120 Hb_044662_050 Hb_044662_050 Hb_000653_020--Hb_044662_050 Hb_004449_140 Hb_004449_140 Hb_000653_020--Hb_004449_140 Hb_124951_010 Hb_124951_010 Hb_013016_010--Hb_124951_010 Hb_013016_010--Hb_074792_010 Hb_000317_190 Hb_000317_190 Hb_013016_010--Hb_000317_190 Hb_002600_130 Hb_002600_130 Hb_013016_010--Hb_002600_130 Hb_000189_390 Hb_000189_390 Hb_013016_010--Hb_000189_390 Hb_003430_040 Hb_003430_040 Hb_074792_010--Hb_003430_040 Hb_000300_710 Hb_000300_710 Hb_074792_010--Hb_000300_710 Hb_074792_010--Hb_000347_140 Hb_000732_030 Hb_000732_030 Hb_074792_010--Hb_000732_030 Hb_000638_260 Hb_000638_260 Hb_074792_010--Hb_000638_260 Hb_003874_010 Hb_003874_010 Hb_074792_010--Hb_003874_010 Hb_000347_140--Hb_003430_040 Hb_000347_140--Hb_000300_710 Hb_188739_010 Hb_188739_010 Hb_000347_140--Hb_188739_010 Hb_000032_200 Hb_000032_200 Hb_000347_140--Hb_000032_200 Hb_000347_140--Hb_000638_260 Hb_001279_050 Hb_001279_050 Hb_028487_120--Hb_001279_050 Hb_008406_100 Hb_008406_100 Hb_028487_120--Hb_008406_100 Hb_022092_040 Hb_022092_040 Hb_028487_120--Hb_022092_040 Hb_028487_120--Hb_000638_260 Hb_000960_120 Hb_000960_120 Hb_028487_120--Hb_000960_120 Hb_024973_020 Hb_024973_020 Hb_028487_120--Hb_024973_020 Hb_000321_080 Hb_000321_080 Hb_044662_050--Hb_000321_080 Hb_002007_040 Hb_002007_040 Hb_044662_050--Hb_002007_040 Hb_002221_010 Hb_002221_010 Hb_044662_050--Hb_002221_010 Hb_044662_050--Hb_004449_140 Hb_002007_280 Hb_002007_280 Hb_044662_050--Hb_002007_280 Hb_001214_190 Hb_001214_190 Hb_004449_140--Hb_001214_190 Hb_176472_020 Hb_176472_020 Hb_004449_140--Hb_176472_020 Hb_004449_140--Hb_003430_040 Hb_004449_140--Hb_074792_010 Hb_003938_170 Hb_003938_170 Hb_004449_140--Hb_003938_170 Hb_002218_100 Hb_002218_100 Hb_004449_140--Hb_002218_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
291.447 360.511 3133.97 109.335 176.708 131.614
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
83.7225 89.3991 62.8691 141.372 104.469

CAGE analysis