Hb_000638_260

Information

Type -
Description -
Location Contig638: 195547-209280
Sequence    

Annotation

kegg
ID rcu:RCOM_0072440
description Kinesin heavy chain, putative
nr
ID KDP37828.1
description hypothetical protein JCGZ_06730 [Jatropha curcas]
swissprot
ID Q02224
description Centromere-associated protein E OS=Homo sapiens GN=CENPE PE=1 SV=2
trembl
ID A0A067KS70
description Kinesin-like protein OS=Jatropha curcas GN=JCGZ_06730 PE=3 SV=1
Gene Ontology
ID GO:0005871
description centromere-associated protein e isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_52041: 195013-195151 , PASA_asmbl_52042: 195593-197197 , PASA_asmbl_52043: 199049-201094 , PASA_asmbl_52044: 202329-203054 , PASA_asmbl_52045: 204218-205690 , PASA_asmbl_52046: 208615-208957
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000638_260 0.0 - - hypothetical protein JCGZ_06730 [Jatropha curcas]
2 Hb_000347_140 0.1316639407 - - PREDICTED: protein FLUORESCENT IN BLUE LIGHT, chloroplastic isoform X2 [Jatropha curcas]
3 Hb_074792_010 0.1352242499 - - PREDICTED: probable lactoylglutathione lyase, chloroplast [Gossypium raimondii]
4 Hb_028487_120 0.1437153851 - - PREDICTED: HMG-Y-related protein B-like [Jatropha curcas]
5 Hb_000345_410 0.1483972351 - - PREDICTED: kinesin-like protein KIFC3 [Jatropha curcas]
6 Hb_008406_100 0.1498072804 - - PREDICTED: protein TPX2 isoform X2 [Jatropha curcas]
7 Hb_003430_040 0.1518406606 - - spermidine synthase 1, putative [Ricinus communis]
8 Hb_012653_010 0.1526032959 - - PREDICTED: subtilisin-like protease SBT2.5 [Jatropha curcas]
9 Hb_000300_710 0.1539149204 - - PREDICTED: uncharacterized protein LOC105123549 [Populus euphratica]
10 Hb_024973_020 0.1552601332 - - Protein regulator of cytokinesis, putative [Ricinus communis]
11 Hb_000816_210 0.1608234298 - - PREDICTED: uroporphyrinogen decarboxylase isoform X2 [Jatropha curcas]
12 Hb_000732_030 0.1686807406 - - conserved hypothetical protein [Ricinus communis]
13 Hb_005162_130 0.1700070859 - - PREDICTED: uncharacterized protein LOC105648433 isoform X2 [Jatropha curcas]
14 Hb_002960_110 0.1735426005 - - PREDICTED: synaptotagmin-2 isoform X1 [Jatropha curcas]
15 Hb_004957_020 0.1817208278 - - conserved hypothetical protein [Ricinus communis]
16 Hb_000640_050 0.1859858723 - - DNA replication licensing factor MCM7, putative [Ricinus communis]
17 Hb_188739_010 0.1880136176 - - protein binding protein, putative [Ricinus communis]
18 Hb_002007_280 0.1895713334 - - PREDICTED: kinesin-like protein KIFC3 [Jatropha curcas]
19 Hb_000032_200 0.1907123356 - - PREDICTED: probable polygalacturonase [Jatropha curcas]
20 Hb_000321_080 0.1907736476 - - histone H4 [Zea mays]

Gene co-expression network

sample Hb_000638_260 Hb_000638_260 Hb_000347_140 Hb_000347_140 Hb_000638_260--Hb_000347_140 Hb_074792_010 Hb_074792_010 Hb_000638_260--Hb_074792_010 Hb_028487_120 Hb_028487_120 Hb_000638_260--Hb_028487_120 Hb_000345_410 Hb_000345_410 Hb_000638_260--Hb_000345_410 Hb_008406_100 Hb_008406_100 Hb_000638_260--Hb_008406_100 Hb_003430_040 Hb_003430_040 Hb_000638_260--Hb_003430_040 Hb_000347_140--Hb_003430_040 Hb_000347_140--Hb_074792_010 Hb_000300_710 Hb_000300_710 Hb_000347_140--Hb_000300_710 Hb_188739_010 Hb_188739_010 Hb_000347_140--Hb_188739_010 Hb_000032_200 Hb_000032_200 Hb_000347_140--Hb_000032_200 Hb_074792_010--Hb_003430_040 Hb_074792_010--Hb_000300_710 Hb_000732_030 Hb_000732_030 Hb_074792_010--Hb_000732_030 Hb_003874_010 Hb_003874_010 Hb_074792_010--Hb_003874_010 Hb_001279_050 Hb_001279_050 Hb_028487_120--Hb_001279_050 Hb_028487_120--Hb_008406_100 Hb_022092_040 Hb_022092_040 Hb_028487_120--Hb_022092_040 Hb_000960_120 Hb_000960_120 Hb_028487_120--Hb_000960_120 Hb_024973_020 Hb_024973_020 Hb_028487_120--Hb_024973_020 Hb_002007_280 Hb_002007_280 Hb_000345_410--Hb_002007_280 Hb_005162_130 Hb_005162_130 Hb_000345_410--Hb_005162_130 Hb_000345_410--Hb_008406_100 Hb_000321_080 Hb_000321_080 Hb_000345_410--Hb_000321_080 Hb_010998_050 Hb_010998_050 Hb_000345_410--Hb_010998_050 Hb_000345_130 Hb_000345_130 Hb_000345_410--Hb_000345_130 Hb_008406_100--Hb_005162_130 Hb_008406_100--Hb_002007_280 Hb_008406_100--Hb_024973_020 Hb_000365_210 Hb_000365_210 Hb_008406_100--Hb_000365_210 Hb_001501_070 Hb_001501_070 Hb_008406_100--Hb_001501_070 Hb_003430_040--Hb_003874_010 Hb_003430_040--Hb_000732_030 Hb_003430_040--Hb_000032_200 Hb_003430_040--Hb_000300_710
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.06742 0.54027 8.16138 1.5135 0.947027 0.708021
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.266174 0.163931 0.139818 0.451022 0.79947

CAGE analysis