Hb_000365_210

Information

Type -
Description -
Location Contig365: 194752-197206
Sequence    

Annotation

kegg
ID rcu:RCOM_1323160
description CDK, putative (EC:2.7.11.23)
nr
ID XP_012090971.1
description PREDICTED: cell division control protein 2 homolog C [Jatropha curcas]
swissprot
ID Q2V419
description Cyclin-dependent kinase B1-2 OS=Arabidopsis thaliana GN=CDKB1-2 PE=1 SV=2
trembl
ID A0A067JD95
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00608 PE=4 SV=1
Gene Ontology
ID GO:0005524
description cell division control protein 2 homolog c

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_37576: 194989-197020
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000365_210 0.0 - - PREDICTED: cell division control protein 2 homolog C [Jatropha curcas]
2 Hb_001501_070 0.1020972735 - - PREDICTED: condensin complex subunit 2 [Jatropha curcas]
3 Hb_000288_090 0.105465557 - - unnamed protein product [Vitis vinifera]
4 Hb_001761_010 0.1079920774 - - PREDICTED: uncharacterized protein LOC105639282 [Jatropha curcas]
5 Hb_008406_100 0.1222547374 - - PREDICTED: protein TPX2 isoform X2 [Jatropha curcas]
6 Hb_001584_360 0.1236766854 - - PREDICTED: serine/threonine-protein kinase haspin homolog hrk1 [Jatropha curcas]
7 Hb_000028_530 0.1249044767 - - Protein regulator of cytokinesis, putative [Ricinus communis]
8 Hb_010180_030 0.1265070324 - - PREDICTED: WEB family protein At2g38370-like [Jatropha curcas]
9 Hb_000334_120 0.1267814813 - - PREDICTED: DNA topoisomerase 2 [Jatropha curcas]
10 Hb_001478_020 0.1284564135 desease resistance Gene Name: AAA thyroid hormone receptor interactor, putative [Ricinus communis]
11 Hb_001780_080 0.1298690955 - - PREDICTED: tubulin beta-2 chain [Jatropha curcas]
12 Hb_038044_010 0.131084431 - - 12-oxophytodienoate reductase 2 [Theobroma cacao]
13 Hb_002311_090 0.1374218361 - - PREDICTED: uncharacterized protein LOC105643503 [Jatropha curcas]
14 Hb_011360_130 0.1399799212 - - conserved hypothetical protein [Ricinus communis]
15 Hb_000003_060 0.1423625898 transcription factor TF Family: HMG DNA-binding protein MNB1B, putative [Ricinus communis]
16 Hb_001454_180 0.1427818141 - - PREDICTED: uncharacterized protein LOC105643432 [Jatropha curcas]
17 Hb_001328_070 0.1438322718 - - PREDICTED: glucan endo-1,3-beta-glucosidase 13 [Jatropha curcas]
18 Hb_002007_280 0.1438665737 - - PREDICTED: kinesin-like protein KIFC3 [Jatropha curcas]
19 Hb_000960_120 0.1459578634 - - PREDICTED: cell division cycle 20.1, cofactor of APC complex-like [Jatropha curcas]
20 Hb_024973_020 0.1486699499 - - Protein regulator of cytokinesis, putative [Ricinus communis]

Gene co-expression network

sample Hb_000365_210 Hb_000365_210 Hb_001501_070 Hb_001501_070 Hb_000365_210--Hb_001501_070 Hb_000288_090 Hb_000288_090 Hb_000365_210--Hb_000288_090 Hb_001761_010 Hb_001761_010 Hb_000365_210--Hb_001761_010 Hb_008406_100 Hb_008406_100 Hb_000365_210--Hb_008406_100 Hb_001584_360 Hb_001584_360 Hb_000365_210--Hb_001584_360 Hb_000028_530 Hb_000028_530 Hb_000365_210--Hb_000028_530 Hb_001478_020 Hb_001478_020 Hb_001501_070--Hb_001478_020 Hb_038044_010 Hb_038044_010 Hb_001501_070--Hb_038044_010 Hb_010180_030 Hb_010180_030 Hb_001501_070--Hb_010180_030 Hb_029510_130 Hb_029510_130 Hb_001501_070--Hb_029510_130 Hb_024973_020 Hb_024973_020 Hb_001501_070--Hb_024973_020 Hb_000181_270 Hb_000181_270 Hb_000288_090--Hb_000181_270 Hb_006970_130 Hb_006970_130 Hb_000288_090--Hb_006970_130 Hb_000003_060 Hb_000003_060 Hb_000288_090--Hb_000003_060 Hb_000260_650 Hb_000260_650 Hb_000288_090--Hb_000260_650 Hb_004920_050 Hb_004920_050 Hb_000288_090--Hb_004920_050 Hb_012753_150 Hb_012753_150 Hb_001761_010--Hb_012753_150 Hb_001761_010--Hb_000028_530 Hb_000960_120 Hb_000960_120 Hb_001761_010--Hb_000960_120 Hb_002232_310 Hb_002232_310 Hb_001761_010--Hb_002232_310 Hb_001761_010--Hb_024973_020 Hb_005162_130 Hb_005162_130 Hb_008406_100--Hb_005162_130 Hb_002007_280 Hb_002007_280 Hb_008406_100--Hb_002007_280 Hb_000345_410 Hb_000345_410 Hb_008406_100--Hb_000345_410 Hb_008406_100--Hb_024973_020 Hb_008406_100--Hb_001501_070 Hb_000334_120 Hb_000334_120 Hb_001584_360--Hb_000334_120 Hb_001688_100 Hb_001688_100 Hb_001584_360--Hb_001688_100 Hb_033041_010 Hb_033041_010 Hb_001584_360--Hb_033041_010 Hb_005183_150 Hb_005183_150 Hb_001584_360--Hb_005183_150 Hb_007632_080 Hb_007632_080 Hb_001584_360--Hb_007632_080 Hb_101133_050 Hb_101133_050 Hb_001584_360--Hb_101133_050 Hb_000028_530--Hb_000334_120 Hb_000265_100 Hb_000265_100 Hb_000028_530--Hb_000265_100 Hb_002374_090 Hb_002374_090 Hb_000028_530--Hb_002374_090 Hb_000189_350 Hb_000189_350 Hb_000028_530--Hb_000189_350 Hb_000028_530--Hb_033041_010 Hb_004963_020 Hb_004963_020 Hb_000028_530--Hb_004963_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.524531 0.854409 16.7093 5.50719 0.297817 0.315068
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.697346 0.354938 0.359981 2.15899 0.667438

CAGE analysis