Hb_001761_010

Information

Type -
Description -
Location Contig1761: 6705-10010
Sequence    

Annotation

kegg
ID rcu:RCOM_0925780
description hypothetical protein
nr
ID XP_012078677.1
description PREDICTED: uncharacterized protein LOC105639282 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KBE9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13248 PE=4 SV=1
Gene Ontology
ID GO:0005829
description serine arginine repetitive matrix protein 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001761_010 0.0 - - PREDICTED: uncharacterized protein LOC105639282 [Jatropha curcas]
2 Hb_012753_150 0.1007809102 transcription factor TF Family: GRAS DELLA protein RGL1, putative [Ricinus communis]
3 Hb_000028_530 0.1079426973 - - Protein regulator of cytokinesis, putative [Ricinus communis]
4 Hb_000365_210 0.1079920774 - - PREDICTED: cell division control protein 2 homolog C [Jatropha curcas]
5 Hb_000960_120 0.1108431818 - - PREDICTED: cell division cycle 20.1, cofactor of APC complex-like [Jatropha curcas]
6 Hb_002232_310 0.1111753854 - - PREDICTED: uncharacterized protein LOC105635987 [Jatropha curcas]
7 Hb_024973_020 0.1189765452 - - Protein regulator of cytokinesis, putative [Ricinus communis]
8 Hb_000265_100 0.1201165304 - - PREDICTED: uncharacterized protein LOC105643473 [Jatropha curcas]
9 Hb_022092_040 0.1224308978 - - PREDICTED: serine/arginine repetitive matrix protein 1 [Jatropha curcas]
10 Hb_001501_070 0.1245197073 - - PREDICTED: condensin complex subunit 2 [Jatropha curcas]
11 Hb_001934_040 0.1268308059 - - PREDICTED: vacuolar iron transporter 1-like [Jatropha curcas]
12 Hb_007441_290 0.1295928562 - - PREDICTED: uncharacterized protein LOC105643262 [Jatropha curcas]
13 Hb_033152_060 0.1298948393 - - PREDICTED: phragmoplast orienting kinesin 2 [Jatropha curcas]
14 Hb_000334_120 0.130714763 - - PREDICTED: DNA topoisomerase 2 [Jatropha curcas]
15 Hb_003935_090 0.1318271831 - - PREDICTED: uncharacterized protein At4g38062 [Jatropha curcas]
16 Hb_000189_350 0.1343921454 transcription factor TF Family: CPP PREDICTED: protein tesmin/TSO1-like CXC 3 [Jatropha curcas]
17 Hb_003109_010 0.1348604603 - - PREDICTED: kinesin-like protein KIN12B [Jatropha curcas]
18 Hb_001864_040 0.1353715646 - - PREDICTED: kinesin-1 [Jatropha curcas]
19 Hb_002205_180 0.1374742538 - - PREDICTED: uncharacterized protein LOC105649178 [Jatropha curcas]
20 Hb_038044_010 0.1386794113 - - 12-oxophytodienoate reductase 2 [Theobroma cacao]

Gene co-expression network

sample Hb_001761_010 Hb_001761_010 Hb_012753_150 Hb_012753_150 Hb_001761_010--Hb_012753_150 Hb_000028_530 Hb_000028_530 Hb_001761_010--Hb_000028_530 Hb_000365_210 Hb_000365_210 Hb_001761_010--Hb_000365_210 Hb_000960_120 Hb_000960_120 Hb_001761_010--Hb_000960_120 Hb_002232_310 Hb_002232_310 Hb_001761_010--Hb_002232_310 Hb_024973_020 Hb_024973_020 Hb_001761_010--Hb_024973_020 Hb_006060_010 Hb_006060_010 Hb_012753_150--Hb_006060_010 Hb_000388_040 Hb_000388_040 Hb_012753_150--Hb_000388_040 Hb_005568_140 Hb_005568_140 Hb_012753_150--Hb_005568_140 Hb_004109_100 Hb_004109_100 Hb_012753_150--Hb_004109_100 Hb_010267_020 Hb_010267_020 Hb_012753_150--Hb_010267_020 Hb_000334_120 Hb_000334_120 Hb_000028_530--Hb_000334_120 Hb_000265_100 Hb_000265_100 Hb_000028_530--Hb_000265_100 Hb_002374_090 Hb_002374_090 Hb_000028_530--Hb_002374_090 Hb_000189_350 Hb_000189_350 Hb_000028_530--Hb_000189_350 Hb_033041_010 Hb_033041_010 Hb_000028_530--Hb_033041_010 Hb_004963_020 Hb_004963_020 Hb_000028_530--Hb_004963_020 Hb_001501_070 Hb_001501_070 Hb_000365_210--Hb_001501_070 Hb_000288_090 Hb_000288_090 Hb_000365_210--Hb_000288_090 Hb_008406_100 Hb_008406_100 Hb_000365_210--Hb_008406_100 Hb_001584_360 Hb_001584_360 Hb_000365_210--Hb_001584_360 Hb_000365_210--Hb_000028_530 Hb_013344_010 Hb_013344_010 Hb_000960_120--Hb_013344_010 Hb_022092_040 Hb_022092_040 Hb_000960_120--Hb_022092_040 Hb_002811_210 Hb_002811_210 Hb_000960_120--Hb_002811_210 Hb_000960_120--Hb_006060_010 Hb_000960_120--Hb_008406_100 Hb_001755_040 Hb_001755_040 Hb_002232_310--Hb_001755_040 Hb_003935_090 Hb_003935_090 Hb_002232_310--Hb_003935_090 Hb_010705_040 Hb_010705_040 Hb_002232_310--Hb_010705_040 Hb_003109_010 Hb_003109_010 Hb_002232_310--Hb_003109_010 Hb_002232_310--Hb_004109_100 Hb_007574_020 Hb_007574_020 Hb_002232_310--Hb_007574_020 Hb_012653_010 Hb_012653_010 Hb_024973_020--Hb_012653_010 Hb_038044_010 Hb_038044_010 Hb_024973_020--Hb_038044_010 Hb_004218_050 Hb_004218_050 Hb_024973_020--Hb_004218_050 Hb_024973_020--Hb_001501_070 Hb_024973_020--Hb_008406_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.373122 1.00923 14.3367 3.61435 0.232361 0.152916
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.218298 0.120235 0.130392 1.25702 1.05362

CAGE analysis