Hb_012653_010

Information

Type -
Description -
Location Contig12653: 16743-25898
Sequence    

Annotation

kegg
ID pop:POPTR_0001s43080g
description hypothetical protein
nr
ID XP_012075543.1
description PREDICTED: subtilisin-like protease SBT2.5 [Jatropha curcas]
swissprot
ID O64481
description Subtilisin-like protease SBT2.5 OS=Arabidopsis thaliana GN=SBT2.5 PE=2 SV=1
trembl
ID A0A067KFH4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09165 PE=3 SV=1
Gene Ontology
ID GO:0004252
description subtilisin-like protease

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_07990: 16462-26194 , PASA_asmbl_07991: 17768-17919
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_012653_010 0.0 - - PREDICTED: subtilisin-like protease SBT2.5 [Jatropha curcas]
2 Hb_024973_020 0.0988578537 - - Protein regulator of cytokinesis, putative [Ricinus communis]
3 Hb_004218_050 0.1159697455 - - annexin [Manihot esculenta]
4 Hb_001343_120 0.1260604853 - - conserved hypothetical protein [Ricinus communis]
5 Hb_003935_090 0.1305114373 - - PREDICTED: uncharacterized protein At4g38062 [Jatropha curcas]
6 Hb_000042_390 0.1363071069 - - PREDICTED: cyclin-dependent kinase inhibitor 7 [Jatropha curcas]
7 Hb_001536_020 0.1469041585 transcription factor TF Family: GRF PREDICTED: uncharacterized protein LOC105631006 [Jatropha curcas]
8 Hb_012055_080 0.1481631114 - - PREDICTED: lysine-rich arabinogalactan protein 18-like [Jatropha curcas]
9 Hb_000638_260 0.1526032959 - - hypothetical protein JCGZ_06730 [Jatropha curcas]
10 Hb_081529_010 0.1545610631 - - unnamed protein product [Vitis vinifera]
11 Hb_002999_030 0.1557945582 - - PREDICTED: beta-1,3-galactosyltransferase 15 [Jatropha curcas]
12 Hb_008406_100 0.1559252792 - - PREDICTED: protein TPX2 isoform X2 [Jatropha curcas]
13 Hb_000020_080 0.164098945 transcription factor TF Family: MYB hypothetical protein JCGZ_09080 [Jatropha curcas]
14 Hb_028487_120 0.1641469504 - - PREDICTED: HMG-Y-related protein B-like [Jatropha curcas]
15 Hb_010683_070 0.1708468207 - - PREDICTED: DNA (cytosine-5)-methyltransferase CMT2 isoform X1 [Jatropha curcas]
16 Hb_002232_310 0.1710129786 - - PREDICTED: uncharacterized protein LOC105635987 [Jatropha curcas]
17 Hb_000347_140 0.1724690911 - - PREDICTED: protein FLUORESCENT IN BLUE LIGHT, chloroplastic isoform X2 [Jatropha curcas]
18 Hb_007574_020 0.1724977494 - - PREDICTED: uncharacterized protein LOC105638146 [Jatropha curcas]
19 Hb_010863_030 0.1729920025 - - PREDICTED: uncharacterized protein LOC105642466 [Jatropha curcas]
20 Hb_001488_290 0.1731049348 - - Ras-GTPase-activating protein-binding protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_012653_010 Hb_012653_010 Hb_024973_020 Hb_024973_020 Hb_012653_010--Hb_024973_020 Hb_004218_050 Hb_004218_050 Hb_012653_010--Hb_004218_050 Hb_001343_120 Hb_001343_120 Hb_012653_010--Hb_001343_120 Hb_003935_090 Hb_003935_090 Hb_012653_010--Hb_003935_090 Hb_000042_390 Hb_000042_390 Hb_012653_010--Hb_000042_390 Hb_001536_020 Hb_001536_020 Hb_012653_010--Hb_001536_020 Hb_038044_010 Hb_038044_010 Hb_024973_020--Hb_038044_010 Hb_024973_020--Hb_004218_050 Hb_001501_070 Hb_001501_070 Hb_024973_020--Hb_001501_070 Hb_008406_100 Hb_008406_100 Hb_024973_020--Hb_008406_100 Hb_001761_010 Hb_001761_010 Hb_024973_020--Hb_001761_010 Hb_002942_120 Hb_002942_120 Hb_004218_050--Hb_002942_120 Hb_010683_070 Hb_010683_070 Hb_004218_050--Hb_010683_070 Hb_004218_050--Hb_001343_120 Hb_004223_170 Hb_004223_170 Hb_004218_050--Hb_004223_170 Hb_001343_120--Hb_000042_390 Hb_002435_090 Hb_002435_090 Hb_001343_120--Hb_002435_090 Hb_001975_050 Hb_001975_050 Hb_001343_120--Hb_001975_050 Hb_000207_140 Hb_000207_140 Hb_001343_120--Hb_000207_140 Hb_002540_060 Hb_002540_060 Hb_001343_120--Hb_002540_060 Hb_007574_020 Hb_007574_020 Hb_003935_090--Hb_007574_020 Hb_002232_310 Hb_002232_310 Hb_003935_090--Hb_002232_310 Hb_004109_100 Hb_004109_100 Hb_003935_090--Hb_004109_100 Hb_001755_040 Hb_001755_040 Hb_003935_090--Hb_001755_040 Hb_012055_080 Hb_012055_080 Hb_003935_090--Hb_012055_080 Hb_023344_100 Hb_023344_100 Hb_003935_090--Hb_023344_100 Hb_000042_390--Hb_001536_020 Hb_001347_030 Hb_001347_030 Hb_000042_390--Hb_001347_030 Hb_107078_010 Hb_107078_010 Hb_000042_390--Hb_107078_010 Hb_000494_010 Hb_000494_010 Hb_000042_390--Hb_000494_010 Hb_001536_020--Hb_001347_030 Hb_000753_170 Hb_000753_170 Hb_001536_020--Hb_000753_170 Hb_010863_030 Hb_010863_030 Hb_001536_020--Hb_010863_030 Hb_173029_030 Hb_173029_030 Hb_001536_020--Hb_173029_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.85806 2.13064 28.5757 8.09288 1.55058 2.39587
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.263425 0.262562 0.237126 1.90961 5.4055

CAGE analysis