Hb_010863_030

Information

Type -
Description -
Location Contig10863: 18930-19705
Sequence    

Annotation

kegg
ID rcu:RCOM_0555430
description hypothetical protein
nr
ID XP_012082687.1
description PREDICTED: uncharacterized protein LOC105642466 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID B9S3V1
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0555430 PE=4 SV=1
Gene Ontology
ID GO:0006661
description zinc metalloproteinase aureolysin

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_02616: 18957-19866
cDNA
(Sanger)
(ID:Location)		 047_N13.ab1: 18953-19866

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010863_030 0.0 - - PREDICTED: uncharacterized protein LOC105642466 [Jatropha curcas]
2 Hb_010683_030 0.1184708662 - - conserved hypothetical protein [Ricinus communis]
3 Hb_000320_310 0.1288353789 - - PREDICTED: ankyrin repeat domain-containing protein 13C [Jatropha curcas]
4 Hb_005000_010 0.1334749683 - - PREDICTED: K(+) efflux antiporter 4 isoform X1 [Jatropha curcas]
5 Hb_002897_010 0.1404689403 - - PREDICTED: probable inactive receptor kinase At5g58300 [Jatropha curcas]
6 Hb_010683_070 0.1426456602 - - PREDICTED: DNA (cytosine-5)-methyltransferase CMT2 isoform X1 [Jatropha curcas]
7 Hb_001536_020 0.1430096571 transcription factor TF Family: GRF PREDICTED: uncharacterized protein LOC105631006 [Jatropha curcas]
8 Hb_001347_030 0.1444082972 - - ubiquitin-protein ligase, putative [Ricinus communis]
9 Hb_000227_400 0.1571266502 - - lipoxygenase, putative [Ricinus communis]
10 Hb_004447_050 0.1592614624 - - PREDICTED: high-light-induced protein, chloroplastic [Jatropha curcas]
11 Hb_004218_200 0.1594103231 - - Ran GTPase binding protein, putative [Ricinus communis]
12 Hb_004115_010 0.1652554378 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein HDG11 [Jatropha curcas]
13 Hb_001221_060 0.1683648349 - - PREDICTED: cycloeucalenol cycloisomerase [Jatropha curcas]
14 Hb_000061_430 0.1716383126 - - conserved hypothetical protein [Ricinus communis]
15 Hb_000042_390 0.1717855431 - - PREDICTED: cyclin-dependent kinase inhibitor 7 [Jatropha curcas]
16 Hb_001638_120 0.1719391822 - - PREDICTED: CBL-interacting serine/threonine-protein kinase 9 [Jatropha curcas]
17 Hb_002463_050 0.1725399118 - - conserved hypothetical protein [Ricinus communis]
18 Hb_012653_010 0.1729920025 - - PREDICTED: subtilisin-like protease SBT2.5 [Jatropha curcas]
19 Hb_006133_020 0.1745114083 - - PREDICTED: DNA (cytosine-5)-methyltransferase DRM2 [Jatropha curcas]
20 Hb_001141_350 0.1749834208 - - hypothetical protein JCGZ_02174 [Jatropha curcas]

Gene co-expression network

sample Hb_010863_030 Hb_010863_030 Hb_010683_030 Hb_010683_030 Hb_010863_030--Hb_010683_030 Hb_000320_310 Hb_000320_310 Hb_010863_030--Hb_000320_310 Hb_005000_010 Hb_005000_010 Hb_010863_030--Hb_005000_010 Hb_002897_010 Hb_002897_010 Hb_010863_030--Hb_002897_010 Hb_010683_070 Hb_010683_070 Hb_010863_030--Hb_010683_070 Hb_001536_020 Hb_001536_020 Hb_010863_030--Hb_001536_020 Hb_004447_050 Hb_004447_050 Hb_010683_030--Hb_004447_050 Hb_018133_070 Hb_018133_070 Hb_010683_030--Hb_018133_070 Hb_000032_360 Hb_000032_360 Hb_010683_030--Hb_000032_360 Hb_010683_030--Hb_005000_010 Hb_004705_070 Hb_004705_070 Hb_010683_030--Hb_004705_070 Hb_000320_310--Hb_005000_010 Hb_004218_200 Hb_004218_200 Hb_000320_310--Hb_004218_200 Hb_000320_310--Hb_002897_010 Hb_001123_310 Hb_001123_310 Hb_000320_310--Hb_001123_310 Hb_001195_550 Hb_001195_550 Hb_000320_310--Hb_001195_550 Hb_004330_020 Hb_004330_020 Hb_005000_010--Hb_004330_020 Hb_000274_050 Hb_000274_050 Hb_005000_010--Hb_000274_050 Hb_005000_010--Hb_004218_200 Hb_002876_200 Hb_002876_200 Hb_005000_010--Hb_002876_200 Hb_002463_050 Hb_002463_050 Hb_002897_010--Hb_002463_050 Hb_003687_040 Hb_003687_040 Hb_002897_010--Hb_003687_040 Hb_000316_060 Hb_000316_060 Hb_002897_010--Hb_000316_060 Hb_008250_020 Hb_008250_020 Hb_002897_010--Hb_008250_020 Hb_004678_030 Hb_004678_030 Hb_002897_010--Hb_004678_030 Hb_004218_050 Hb_004218_050 Hb_010683_070--Hb_004218_050 Hb_004223_170 Hb_004223_170 Hb_010683_070--Hb_004223_170 Hb_001579_190 Hb_001579_190 Hb_010683_070--Hb_001579_190 Hb_007952_050 Hb_007952_050 Hb_010683_070--Hb_007952_050 Hb_007101_270 Hb_007101_270 Hb_010683_070--Hb_007101_270 Hb_000042_390 Hb_000042_390 Hb_001536_020--Hb_000042_390 Hb_001347_030 Hb_001347_030 Hb_001536_020--Hb_001347_030 Hb_000753_170 Hb_000753_170 Hb_001536_020--Hb_000753_170 Hb_012653_010 Hb_012653_010 Hb_001536_020--Hb_012653_010 Hb_173029_030 Hb_173029_030 Hb_001536_020--Hb_173029_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.85215 3.50499 18.1344 8.81947 0.419881 1.32048
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 1.86012 6.72646

CAGE analysis