Hb_004678_030

Information

Type -
Description -
Location Contig4678: 31625-34462
Sequence    

Annotation

kegg
ID cam:101498777
description fructokinase-2-like
nr
ID AJK93567.1
description fructokinase [Manihot esculenta]
swissprot
ID Q42896
description Fructokinase-2 OS=Solanum lycopersicum GN=FRK2 PE=2 SV=2
trembl
ID A0A0C5B949
description FRK3 protein OS=Manihot esculenta GN=FRK3 PE=2 SV=1
Gene Ontology
ID GO:0004747
description probable fructokinase-4-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_44135: 31628-34467
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004678_030 0.0 - - fructokinase [Manihot esculenta]
2 Hb_000654_050 0.069455009 - - hypothetical protein POPTR_0005s07810g [Populus trichocarpa]
3 Hb_000027_170 0.1085542088 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g68400 [Jatropha curcas]
4 Hb_002463_050 0.1088156984 - - conserved hypothetical protein [Ricinus communis]
5 Hb_001019_160 0.1174838431 - - conserved hypothetical protein [Ricinus communis]
6 Hb_000061_310 0.1228274448 - - PREDICTED: probable serine/threonine-protein kinase At1g54610 isoform X1 [Jatropha curcas]
7 Hb_005245_140 0.1242421466 - - PREDICTED: ribonuclease 2 [Jatropha curcas]
8 Hb_003687_040 0.1266131633 - - PREDICTED: uncharacterized protein LOC105632153 [Jatropha curcas]
9 Hb_000316_060 0.1298303799 - - hypothetical protein CISIN_1g017081mg [Citrus sinensis]
10 Hb_148346_010 0.1306131505 - - -
11 Hb_002235_370 0.1313625147 - - PREDICTED: probable calcium-binding protein CML45 [Jatropha curcas]
12 Hb_002897_010 0.1321314392 - - PREDICTED: probable inactive receptor kinase At5g58300 [Jatropha curcas]
13 Hb_006528_020 0.1355784911 - - conserved hypothetical protein [Ricinus communis]
14 Hb_004899_110 0.1400058611 - - PREDICTED: uncharacterized protein LOC105638015 [Jatropha curcas]
15 Hb_001054_040 0.1400523103 - - hypothetical protein JCGZ_25310 [Jatropha curcas]
16 Hb_000563_630 0.140355738 - - PREDICTED: uncharacterized protein LOC105643442 [Jatropha curcas]
17 Hb_000230_360 0.1436251355 - - PREDICTED: BI1-like protein [Jatropha curcas]
18 Hb_012308_050 0.1441031421 transcription factor TF Family: AUX/IAA PREDICTED: auxin-responsive protein IAA9-like [Jatropha curcas]
19 Hb_000152_170 0.144335219 - - PREDICTED: xyloglucan galactosyltransferase KATAMARI1 homolog [Jatropha curcas]
20 Hb_023226_030 0.1452910057 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein ATHB-14-like [Jatropha curcas]

Gene co-expression network

sample Hb_004678_030 Hb_004678_030 Hb_000654_050 Hb_000654_050 Hb_004678_030--Hb_000654_050 Hb_000027_170 Hb_000027_170 Hb_004678_030--Hb_000027_170 Hb_002463_050 Hb_002463_050 Hb_004678_030--Hb_002463_050 Hb_001019_160 Hb_001019_160 Hb_004678_030--Hb_001019_160 Hb_000061_310 Hb_000061_310 Hb_004678_030--Hb_000061_310 Hb_005245_140 Hb_005245_140 Hb_004678_030--Hb_005245_140 Hb_012308_050 Hb_012308_050 Hb_000654_050--Hb_012308_050 Hb_000654_050--Hb_002463_050 Hb_000320_270 Hb_000320_270 Hb_000654_050--Hb_000320_270 Hb_000654_050--Hb_000061_310 Hb_001054_040 Hb_001054_040 Hb_000654_050--Hb_001054_040 Hb_004899_110 Hb_004899_110 Hb_000027_170--Hb_004899_110 Hb_000008_200 Hb_000008_200 Hb_000027_170--Hb_000008_200 Hb_000027_170--Hb_001054_040 Hb_091318_010 Hb_091318_010 Hb_000027_170--Hb_091318_010 Hb_000316_060 Hb_000316_060 Hb_000027_170--Hb_000316_060 Hb_002897_010 Hb_002897_010 Hb_002463_050--Hb_002897_010 Hb_003687_040 Hb_003687_040 Hb_002463_050--Hb_003687_040 Hb_000015_150 Hb_000015_150 Hb_002463_050--Hb_000015_150 Hb_002463_050--Hb_000061_310 Hb_001019_160--Hb_003687_040 Hb_000834_220 Hb_000834_220 Hb_001019_160--Hb_000834_220 Hb_000230_360 Hb_000230_360 Hb_001019_160--Hb_000230_360 Hb_031385_010 Hb_031385_010 Hb_001019_160--Hb_031385_010 Hb_001440_010 Hb_001440_010 Hb_001019_160--Hb_001440_010 Hb_001019_160--Hb_000061_310 Hb_000061_310--Hb_003687_040 Hb_000061_310--Hb_000230_360 Hb_000061_310--Hb_031385_010 Hb_001048_100 Hb_001048_100 Hb_000061_310--Hb_001048_100 Hb_002301_370 Hb_002301_370 Hb_000061_310--Hb_002301_370 Hb_000165_090 Hb_000165_090 Hb_005245_140--Hb_000165_090 Hb_005245_140--Hb_091318_010 Hb_000030_020 Hb_000030_020 Hb_005245_140--Hb_000030_020 Hb_010315_100 Hb_010315_100 Hb_005245_140--Hb_010315_100 Hb_002110_170 Hb_002110_170 Hb_005245_140--Hb_002110_170
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
5.37384 34.7046 57.5621 59.2181 1.60615 2.798
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.96288 1.90043 0.387829 18.6433 20.7157

CAGE analysis