Hb_010315_100

Information

Type -
Description -
Location Contig10315: 93592-100028
Sequence    

Annotation

kegg
ID egr:104420162
description uncharacterized LOC104420162
nr
ID XP_010030360.1
description PREDICTED: uncharacterized protein LOC104420162 [Eucalyptus grandis]
swissprot
ID P48977
description Alcohol dehydrogenase OS=Malus domestica GN=ADH PE=2 SV=1
trembl
ID A0A067L3L2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25242 PE=3 SV=1
Gene Ontology
ID GO:0008270
description alcohol dehydrogenase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_01300: 97630-100075 , PASA_asmbl_01301: 97632-100069
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010315_100 0.0 - - PREDICTED: uncharacterized protein LOC104420162 [Eucalyptus grandis]
2 Hb_000363_180 0.1255745009 - - PREDICTED: uncharacterized protein LOC105633052 [Jatropha curcas]
3 Hb_002235_370 0.1267053001 - - PREDICTED: probable calcium-binding protein CML45 [Jatropha curcas]
4 Hb_002539_050 0.1272484281 - - PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Jatropha curcas]
5 Hb_003849_120 0.1319083552 - - PREDICTED: uncharacterized protein LOC100264440 [Vitis vinifera]
6 Hb_186247_010 0.13461037 - - PREDICTED: uridine 5'-monophosphate synthase-like [Pyrus x bretschneideri]
7 Hb_000196_010 0.1362519885 - - Patellin-5, putative [Ricinus communis]
8 Hb_028487_130 0.1367524549 - - kinase family protein [Populus trichocarpa]
9 Hb_005245_140 0.137919693 - - PREDICTED: ribonuclease 2 [Jatropha curcas]
10 Hb_148346_010 0.1389664181 - - -
11 Hb_000853_330 0.1449155787 - - PREDICTED: importin subunit alpha-like [Jatropha curcas]
12 Hb_080332_010 0.145593859 - - hypothetical protein POPTR_0018s10590g [Populus trichocarpa]
13 Hb_003430_080 0.1483464375 - - zinc finger protein, putative [Ricinus communis]
14 Hb_002110_170 0.1483503236 - - hypothetical protein CICLE_v10002406mg [Citrus clementina]
15 Hb_005532_020 0.1527202926 - - PREDICTED: uncharacterized protein LOC100262861 [Vitis vinifera]
16 Hb_000732_230 0.1529592742 - - PREDICTED: protein TRANSPORT INHIBITOR RESPONSE 1-like isoform X1 [Jatropha curcas]
17 Hb_011671_280 0.1534075899 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF106-like [Populus euphratica]
18 Hb_004678_030 0.1540021046 - - fructokinase [Manihot esculenta]
19 Hb_001221_390 0.1551696554 - - Phospholipase C 4 precursor, putative [Ricinus communis]
20 Hb_006829_070 0.1555320986 - - PREDICTED: uncharacterized protein LOC105632920 [Jatropha curcas]

Gene co-expression network

sample Hb_010315_100 Hb_010315_100 Hb_000363_180 Hb_000363_180 Hb_010315_100--Hb_000363_180 Hb_002235_370 Hb_002235_370 Hb_010315_100--Hb_002235_370 Hb_002539_050 Hb_002539_050 Hb_010315_100--Hb_002539_050 Hb_003849_120 Hb_003849_120 Hb_010315_100--Hb_003849_120 Hb_186247_010 Hb_186247_010 Hb_010315_100--Hb_186247_010 Hb_000196_010 Hb_000196_010 Hb_010315_100--Hb_000196_010 Hb_000363_180--Hb_000196_010 Hb_009745_010 Hb_009745_010 Hb_000363_180--Hb_009745_010 Hb_000732_230 Hb_000732_230 Hb_000363_180--Hb_000732_230 Hb_000950_040 Hb_000950_040 Hb_000363_180--Hb_000950_040 Hb_001195_420 Hb_001195_420 Hb_000363_180--Hb_001195_420 Hb_001009_150 Hb_001009_150 Hb_000363_180--Hb_001009_150 Hb_004678_030 Hb_004678_030 Hb_002235_370--Hb_004678_030 Hb_164926_050 Hb_164926_050 Hb_002235_370--Hb_164926_050 Hb_002686_210 Hb_002686_210 Hb_002235_370--Hb_002686_210 Hb_003529_240 Hb_003529_240 Hb_002235_370--Hb_003529_240 Hb_002235_370--Hb_002539_050 Hb_002539_050--Hb_186247_010 Hb_003929_190 Hb_003929_190 Hb_002539_050--Hb_003929_190 Hb_002539_050--Hb_000363_180 Hb_148346_010 Hb_148346_010 Hb_002539_050--Hb_148346_010 Hb_004631_170 Hb_004631_170 Hb_002539_050--Hb_004631_170 Hb_000012_400 Hb_000012_400 Hb_003849_120--Hb_000012_400 Hb_000562_100 Hb_000562_100 Hb_003849_120--Hb_000562_100 Hb_000997_070 Hb_000997_070 Hb_003849_120--Hb_000997_070 Hb_002217_080 Hb_002217_080 Hb_003849_120--Hb_002217_080 Hb_000968_060 Hb_000968_060 Hb_003849_120--Hb_000968_060 Hb_009078_020 Hb_009078_020 Hb_003849_120--Hb_009078_020 Hb_001188_050 Hb_001188_050 Hb_186247_010--Hb_001188_050 Hb_006829_070 Hb_006829_070 Hb_186247_010--Hb_006829_070 Hb_186247_010--Hb_004631_170 Hb_002026_020 Hb_002026_020 Hb_186247_010--Hb_002026_020 Hb_000196_010--Hb_009745_010 Hb_002909_100 Hb_002909_100 Hb_000196_010--Hb_002909_100 Hb_000196_010--Hb_000950_040 Hb_000196_010--Hb_000732_230 Hb_052117_010 Hb_052117_010 Hb_000196_010--Hb_052117_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.48606 27.7189 35.9099 41.2305 8.5928 5.51657
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.43615 2.88321 0.0526056 14.3848 14.6641

CAGE analysis