Hb_164926_050

Information

Type -
Description -
Location Contig164926: 38730-42654
Sequence    

Annotation

kegg
ID rcu:RCOM_1314330
description Cucumisin precursor, putative (EC:3.4.21.25)
nr
ID XP_012086639.1
description PREDICTED: subtilisin-like protease SBT3.5 [Jatropha curcas]
swissprot
ID Q9MAP5
description Subtilisin-like protease SBT3.3 OS=Arabidopsis thaliana GN=SBT3.3 PE=2 SV=1
trembl
ID B9RYX0
description Cucumisin, putative OS=Ricinus communis GN=RCOM_1314330 PE=4 SV=1
Gene Ontology
ID GO:0003676
description subtilisin-like protease

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_15171: 39229-39457 , PASA_asmbl_15173: 41951-42558
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_164926_050 0.0 - - PREDICTED: subtilisin-like protease SBT3.5 [Jatropha curcas]
2 Hb_033053_010 0.1078774372 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance protein RGA2-like [Jatropha curcas]
3 Hb_000069_430 0.1254516736 - - PREDICTED: cyclic nucleotide-gated ion channel 1-like [Jatropha curcas]
4 Hb_002078_250 0.1283645722 - - conserved hypothetical protein [Ricinus communis]
5 Hb_007574_050 0.1316300303 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g68400 [Jatropha curcas]
6 Hb_005000_050 0.1340881872 - - PREDICTED: tetraspanin-2 [Jatropha curcas]
7 Hb_002235_370 0.1344291574 - - PREDICTED: probable calcium-binding protein CML45 [Jatropha curcas]
8 Hb_046109_010 0.1354606638 - - PREDICTED: disease resistance protein RGA2-like [Jatropha curcas]
9 Hb_002375_060 0.1368244112 - - PREDICTED: uncharacterized protein LOC105628271 [Jatropha curcas]
10 Hb_012272_010 0.1399613567 - - hypothetical protein JCGZ_26658 [Jatropha curcas]
11 Hb_007904_290 0.1417813269 - - PREDICTED: cytochrome P450 86B1-like [Jatropha curcas]
12 Hb_000152_170 0.1420270148 - - PREDICTED: xyloglucan galactosyltransferase KATAMARI1 homolog [Jatropha curcas]
13 Hb_149484_010 0.1428457231 transcription factor TF Family: NF-YC PREDICTED: dr1-associated corepressor-like [Eucalyptus grandis]
14 Hb_000402_030 0.1434418553 - - PREDICTED: cysteine-rich receptor-like protein kinase 2 [Jatropha curcas]
15 Hb_000366_050 0.1450359521 - - PREDICTED: xylosyltransferase 1-like [Jatropha curcas]
16 Hb_000340_560 0.1450999384 - - conserved hypothetical protein [Ricinus communis]
17 Hb_005375_070 0.1453548641 transcription factor TF Family: MYB-related PREDICTED: protein LHY [Jatropha curcas]
18 Hb_001989_070 0.153095808 - - PREDICTED: uncharacterized calcium-binding protein At1g02270 [Jatropha curcas]
19 Hb_000920_220 0.1537241544 - - PREDICTED: uncharacterized protein LOC105631216 [Jatropha curcas]
20 Hb_002233_080 0.1544860016 - - hypothetical protein JCGZ_00222 [Jatropha curcas]

Gene co-expression network

sample Hb_164926_050 Hb_164926_050 Hb_033053_010 Hb_033053_010 Hb_164926_050--Hb_033053_010 Hb_000069_430 Hb_000069_430 Hb_164926_050--Hb_000069_430 Hb_002078_250 Hb_002078_250 Hb_164926_050--Hb_002078_250 Hb_007574_050 Hb_007574_050 Hb_164926_050--Hb_007574_050 Hb_005000_050 Hb_005000_050 Hb_164926_050--Hb_005000_050 Hb_002235_370 Hb_002235_370 Hb_164926_050--Hb_002235_370 Hb_046109_010 Hb_046109_010 Hb_033053_010--Hb_046109_010 Hb_033053_010--Hb_007574_050 Hb_007904_290 Hb_007904_290 Hb_033053_010--Hb_007904_290 Hb_012272_010 Hb_012272_010 Hb_033053_010--Hb_012272_010 Hb_000340_560 Hb_000340_560 Hb_033053_010--Hb_000340_560 Hb_000069_430--Hb_002078_250 Hb_149484_010 Hb_149484_010 Hb_000069_430--Hb_149484_010 Hb_005539_100 Hb_005539_100 Hb_000069_430--Hb_005539_100 Hb_023386_050 Hb_023386_050 Hb_000069_430--Hb_023386_050 Hb_000069_430--Hb_005000_050 Hb_000411_050 Hb_000411_050 Hb_002078_250--Hb_000411_050 Hb_003656_170 Hb_003656_170 Hb_002078_250--Hb_003656_170 Hb_003964_010 Hb_003964_010 Hb_002078_250--Hb_003964_010 Hb_001123_170 Hb_001123_170 Hb_002078_250--Hb_001123_170 Hb_004544_090 Hb_004544_090 Hb_002078_250--Hb_004544_090 Hb_003025_150 Hb_003025_150 Hb_002078_250--Hb_003025_150 Hb_098160_010 Hb_098160_010 Hb_007574_050--Hb_098160_010 Hb_001898_010 Hb_001898_010 Hb_007574_050--Hb_001898_010 Hb_005375_070 Hb_005375_070 Hb_007574_050--Hb_005375_070 Hb_002936_030 Hb_002936_030 Hb_007574_050--Hb_002936_030 Hb_000402_030 Hb_000402_030 Hb_007574_050--Hb_000402_030 Hb_001405_060 Hb_001405_060 Hb_007574_050--Hb_001405_060 Hb_005000_050--Hb_005375_070 Hb_005000_050--Hb_149484_010 Hb_001951_240 Hb_001951_240 Hb_005000_050--Hb_001951_240 Hb_005000_050--Hb_023386_050 Hb_005000_050--Hb_007574_050 Hb_004712_160 Hb_004712_160 Hb_005000_050--Hb_004712_160 Hb_010315_100 Hb_010315_100 Hb_002235_370--Hb_010315_100 Hb_004678_030 Hb_004678_030 Hb_002235_370--Hb_004678_030 Hb_002686_210 Hb_002686_210 Hb_002235_370--Hb_002686_210 Hb_003529_240 Hb_003529_240 Hb_002235_370--Hb_003529_240 Hb_002539_050 Hb_002539_050 Hb_002235_370--Hb_002539_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.034487 1.92165 1.68666 1.56395 0.160263 0.0970014
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0369409 0.0872039 0 0.658151 0.462966

CAGE analysis