Hb_007904_290

Information

Type -
Description -
Location Contig7904: 192531-194117
Sequence    

Annotation

kegg
ID pop:POPTR_0010s05990g
description POPTRDRAFT_80640; cytochrome P450 family protein
nr
ID XP_012085881.1
description PREDICTED: cytochrome P450 86B1-like [Jatropha curcas]
swissprot
ID Q9FMY1
description Cytochrome P450 86B1 OS=Arabidopsis thaliana GN=CYP86B1 PE=2 SV=1
trembl
ID A0A067JRZ0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17859 PE=3 SV=1
Gene Ontology
ID GO:0005839
description cytochrome p450 86b1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007904_290 0.0 - - PREDICTED: cytochrome P450 86B1-like [Jatropha curcas]
2 Hb_002014_050 0.1191761532 - - PREDICTED: proline-rich receptor-like protein kinase PERK1 isoform X2 [Populus euphratica]
3 Hb_001430_010 0.1200883276 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO2 isoform X2 [Jatropha curcas]
4 Hb_012272_010 0.1204332755 - - hypothetical protein JCGZ_26658 [Jatropha curcas]
5 Hb_000071_090 0.122780796 - - PREDICTED: probable protein phosphatase 2C 4 [Jatropha curcas]
6 Hb_001627_010 0.1258262881 - - Alpha-1,4-glucan-protein synthase [UDP-forming], putative [Ricinus communis]
7 Hb_004970_070 0.1267490689 - - hypothetical protein POPTR_0002s12620g [Populus trichocarpa]
8 Hb_008406_070 0.1280044659 - - PREDICTED: probable protein phosphatase 2C 58 [Jatropha curcas]
9 Hb_033053_010 0.1334998687 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance protein RGA2-like [Jatropha curcas]
10 Hb_005048_120 0.1354592131 - - -
11 Hb_003078_070 0.1401743744 - - PREDICTED: cytochrome b561 and DOMON domain-containing protein At3g25290 [Jatropha curcas]
12 Hb_002936_030 0.1408133224 - - PREDICTED: uncharacterized protein LOC105633479 isoform X1 [Jatropha curcas]
13 Hb_164926_050 0.1417813269 - - PREDICTED: subtilisin-like protease SBT3.5 [Jatropha curcas]
14 Hb_000454_080 0.142956964 - - PREDICTED: arginine decarboxylase [Jatropha curcas]
15 Hb_001019_020 0.1431593606 - - conserved hypothetical protein [Ricinus communis]
16 Hb_001369_670 0.1471580829 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At5g10290 [Jatropha curcas]
17 Hb_000985_140 0.1512342641 - - PREDICTED: uncharacterized protein LOC105643381 isoform X3 [Jatropha curcas]
18 Hb_000984_290 0.1518081964 - - PREDICTED: putative lipase ROG1 isoform X2 [Jatropha curcas]
19 Hb_001247_160 0.1519202697 - - s-adenosylmethionine synthetase, putative [Ricinus communis]
20 Hb_094437_050 0.1575094353 - - PREDICTED: uncharacterized protein LOC105630877 isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_007904_290 Hb_007904_290 Hb_002014_050 Hb_002014_050 Hb_007904_290--Hb_002014_050 Hb_001430_010 Hb_001430_010 Hb_007904_290--Hb_001430_010 Hb_012272_010 Hb_012272_010 Hb_007904_290--Hb_012272_010 Hb_000071_090 Hb_000071_090 Hb_007904_290--Hb_000071_090 Hb_001627_010 Hb_001627_010 Hb_007904_290--Hb_001627_010 Hb_004970_070 Hb_004970_070 Hb_007904_290--Hb_004970_070 Hb_002014_050--Hb_001627_010 Hb_001294_050 Hb_001294_050 Hb_002014_050--Hb_001294_050 Hb_002609_290 Hb_002609_290 Hb_002014_050--Hb_002609_290 Hb_002014_050--Hb_000071_090 Hb_000111_390 Hb_000111_390 Hb_002014_050--Hb_000111_390 Hb_160653_010 Hb_160653_010 Hb_001430_010--Hb_160653_010 Hb_010721_010 Hb_010721_010 Hb_001430_010--Hb_010721_010 Hb_015037_010 Hb_015037_010 Hb_001430_010--Hb_015037_010 Hb_011915_020 Hb_011915_020 Hb_001430_010--Hb_011915_020 Hb_023386_060 Hb_023386_060 Hb_001430_010--Hb_023386_060 Hb_002048_100 Hb_002048_100 Hb_001430_010--Hb_002048_100 Hb_005048_120 Hb_005048_120 Hb_012272_010--Hb_005048_120 Hb_012272_010--Hb_010721_010 Hb_001019_020 Hb_001019_020 Hb_012272_010--Hb_001019_020 Hb_001189_150 Hb_001189_150 Hb_012272_010--Hb_001189_150 Hb_002936_030 Hb_002936_030 Hb_012272_010--Hb_002936_030 Hb_008406_070 Hb_008406_070 Hb_000071_090--Hb_008406_070 Hb_003078_070 Hb_003078_070 Hb_000071_090--Hb_003078_070 Hb_002374_030 Hb_002374_030 Hb_000071_090--Hb_002374_030 Hb_001769_120 Hb_001769_120 Hb_000071_090--Hb_001769_120 Hb_189208_060 Hb_189208_060 Hb_000071_090--Hb_189208_060 Hb_000985_140 Hb_000985_140 Hb_000071_090--Hb_000985_140 Hb_007224_010 Hb_007224_010 Hb_001627_010--Hb_007224_010 Hb_132840_020 Hb_132840_020 Hb_001627_010--Hb_132840_020 Hb_001627_010--Hb_001294_050 Hb_001519_060 Hb_001519_060 Hb_001627_010--Hb_001519_060 Hb_001627_010--Hb_000111_390 Hb_004970_070--Hb_002048_100 Hb_004712_090 Hb_004712_090 Hb_004970_070--Hb_004712_090 Hb_001040_060 Hb_001040_060 Hb_004970_070--Hb_001040_060 Hb_001541_190 Hb_001541_190 Hb_004970_070--Hb_001541_190 Hb_000134_260 Hb_000134_260 Hb_004970_070--Hb_000134_260
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0159758 0.455584 0.600551 0.376537 0.0120399 0.0127623
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0292743 0.0230315 0 0.0826777 0.0965863

CAGE analysis