Hb_007224_010

Information

Type -
Description -
Location Contig7224: 8344-18164
Sequence    

Annotation

kegg
ID rcu:RCOM_1198000
description serine-threonine protein kinase, plant-type, putative (EC:2.7.11.25)
nr
ID XP_012093027.1
description PREDICTED: putative receptor-like protein kinase At4g00960 [Jatropha curcas]
swissprot
ID Q8GYA4
description Cysteine-rich receptor-like protein kinase 10 OS=Arabidopsis thaliana GN=CRK10 PE=1 SV=3
trembl
ID A0A067J8T0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05906 PE=4 SV=1
Gene Ontology
ID GO:0005622
description receptor-like protein kinase at4g00960

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_55730: 8443-18163
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007224_010 0.0 - - PREDICTED: putative receptor-like protein kinase At4g00960 [Jatropha curcas]
2 Hb_001627_010 0.0971380282 - - Alpha-1,4-glucan-protein synthase [UDP-forming], putative [Ricinus communis]
3 Hb_021409_110 0.0979539674 - - WD-repeat protein, putative [Ricinus communis]
4 Hb_132840_020 0.10789956 - - PREDICTED: protein LHY [Jatropha curcas]
5 Hb_001519_060 0.1090730303 - - PREDICTED: glutamyl-tRNA reductase 1, chloroplastic-like [Jatropha curcas]
6 Hb_000086_640 0.1126321497 - - Phytosulfokine receptor precursor, putative [Ricinus communis]
7 Hb_000928_250 0.1176899896 - - calcium ion binding protein, putative [Ricinus communis]
8 Hb_000336_180 0.1215828501 - - conserved hypothetical protein [Ricinus communis]
9 Hb_000622_210 0.1237059731 transcription factor TF Family: bZIP PREDICTED: common plant regulatory factor 1-like isoform X3 [Jatropha curcas]
10 Hb_001894_160 0.1281210669 - - conserved hypothetical protein [Ricinus communis]
11 Hb_002249_170 0.1288082205 - - copine, putative [Ricinus communis]
12 Hb_089305_010 0.1319448866 - - PREDICTED: U-box domain-containing protein 26-like [Jatropha curcas]
13 Hb_002965_080 0.1334618409 transcription factor TF Family: C2C2-GATA PREDICTED: GATA transcription factor 15-like [Jatropha curcas]
14 Hb_001863_340 0.1341387185 - - PREDICTED: probable pectin methyltransferase QUA2 [Jatropha curcas]
15 Hb_011671_110 0.1346213104 - - PREDICTED: uncharacterized protein LOC105648628 [Jatropha curcas]
16 Hb_001386_020 0.1366171906 - - conserved hypothetical protein [Ricinus communis]
17 Hb_000035_490 0.1401922386 transcription factor TF Family: DBB PREDICTED: zinc finger protein CONSTANS-LIKE 4 [Jatropha curcas]
18 Hb_054865_050 0.1403092951 - - calcium-dependent protein kinase, putative [Ricinus communis]
19 Hb_161901_020 0.1404763229 - - PREDICTED: serine/threonine-protein kinase AFC2 isoform X2 [Vitis vinifera]
20 Hb_001294_050 0.1416154115 desease resistance Gene Name: NB-ARC Disease resistance protein RPP13, putative [Ricinus communis]

Gene co-expression network

sample Hb_007224_010 Hb_007224_010 Hb_001627_010 Hb_001627_010 Hb_007224_010--Hb_001627_010 Hb_021409_110 Hb_021409_110 Hb_007224_010--Hb_021409_110 Hb_132840_020 Hb_132840_020 Hb_007224_010--Hb_132840_020 Hb_001519_060 Hb_001519_060 Hb_007224_010--Hb_001519_060 Hb_000086_640 Hb_000086_640 Hb_007224_010--Hb_000086_640 Hb_000928_250 Hb_000928_250 Hb_007224_010--Hb_000928_250 Hb_002014_050 Hb_002014_050 Hb_001627_010--Hb_002014_050 Hb_001627_010--Hb_132840_020 Hb_001294_050 Hb_001294_050 Hb_001627_010--Hb_001294_050 Hb_001627_010--Hb_001519_060 Hb_000111_390 Hb_000111_390 Hb_001627_010--Hb_000111_390 Hb_089305_010 Hb_089305_010 Hb_021409_110--Hb_089305_010 Hb_001621_050 Hb_001621_050 Hb_021409_110--Hb_001621_050 Hb_000110_260 Hb_000110_260 Hb_021409_110--Hb_000110_260 Hb_001863_340 Hb_001863_340 Hb_021409_110--Hb_001863_340 Hb_005725_280 Hb_005725_280 Hb_021409_110--Hb_005725_280 Hb_132840_020--Hb_001294_050 Hb_132840_020--Hb_000086_640 Hb_048476_040 Hb_048476_040 Hb_132840_020--Hb_048476_040 Hb_011381_070 Hb_011381_070 Hb_132840_020--Hb_011381_070 Hb_000329_790 Hb_000329_790 Hb_132840_020--Hb_000329_790 Hb_002965_080 Hb_002965_080 Hb_001519_060--Hb_002965_080 Hb_001396_120 Hb_001396_120 Hb_001519_060--Hb_001396_120 Hb_001579_070 Hb_001579_070 Hb_001519_060--Hb_001579_070 Hb_002217_190 Hb_002217_190 Hb_001519_060--Hb_002217_190 Hb_000035_490 Hb_000035_490 Hb_000086_640--Hb_000035_490 Hb_015807_080 Hb_015807_080 Hb_000086_640--Hb_015807_080 Hb_033930_010 Hb_033930_010 Hb_000086_640--Hb_033930_010 Hb_005941_020 Hb_005941_020 Hb_000086_640--Hb_005941_020 Hb_000753_140 Hb_000753_140 Hb_000086_640--Hb_000753_140 Hb_003106_200 Hb_003106_200 Hb_000928_250--Hb_003106_200 Hb_015026_020 Hb_015026_020 Hb_000928_250--Hb_015026_020 Hb_001894_160 Hb_001894_160 Hb_000928_250--Hb_001894_160 Hb_006935_040 Hb_006935_040 Hb_000928_250--Hb_006935_040 Hb_011671_110 Hb_011671_110 Hb_000928_250--Hb_011671_110 Hb_000622_210 Hb_000622_210 Hb_000928_250--Hb_000622_210
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.08722 26.6729 40.7224 19.1057 1.58986 2.30828
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.27468 4.10103 1.49372 4.14756 17.9835

CAGE analysis