Hb_000753_140

Information

Type -
Description -
Location Contig753: 139974-140948
Sequence    

Annotation

kegg
ID rcu:RCOM_1467340
description hypothetical protein
nr
ID XP_012080437.1
description PREDICTED: uncharacterized protein LOC105640672 [Jatropha curcas]
swissprot
ID Q5U4T7
description Protein bicaudal C homolog 1-B OS=Xenopus laevis GN=bicc1-b PE=2 SV=1
trembl
ID A0A067K588
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11767 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_56913: 140724-141358
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000753_140 0.0 - - PREDICTED: uncharacterized protein LOC105640672 [Jatropha curcas]
2 Hb_000318_410 0.0943971409 - - PREDICTED: extra-large guanine nucleotide-binding protein 1-like [Jatropha curcas]
3 Hb_002804_010 0.1067189819 - - PREDICTED: U-box domain-containing protein 33-like [Jatropha curcas]
4 Hb_000086_640 0.1070502282 - - Phytosulfokine receptor precursor, putative [Ricinus communis]
5 Hb_001386_020 0.108733638 - - conserved hypothetical protein [Ricinus communis]
6 Hb_015807_080 0.11532251 - - PREDICTED: helicase protein MOM1-like [Jatropha curcas]
7 Hb_132840_020 0.1157706113 - - PREDICTED: protein LHY [Jatropha curcas]
8 Hb_005332_140 0.1196587395 - - PREDICTED: uncharacterized membrane protein At3g27390 isoform X2 [Jatropha curcas]
9 Hb_000170_160 0.1225527822 - - PREDICTED: NAD kinase 2, chloroplastic [Jatropha curcas]
10 Hb_007313_070 0.1236430769 - - PREDICTED: gibberellin receptor GID1C [Jatropha curcas]
11 Hb_033930_010 0.1261729149 - - PREDICTED: uncharacterized protein LOC105635519 [Jatropha curcas]
12 Hb_187005_010 0.1266438092 transcription factor TF Family: MYB-related PREDICTED: 1-phosphatidylinositol 3-phosphate 5-kinase [Jatropha curcas]
13 Hb_002482_030 0.1277218459 transcription factor TF Family: PLATZ unknown [Medicago truncatula]
14 Hb_001499_070 0.1299528862 - - PREDICTED: calcium-transporting ATPase 9, plasma membrane-type isoform X1 [Jatropha curcas]
15 Hb_000035_490 0.1319976662 transcription factor TF Family: DBB PREDICTED: zinc finger protein CONSTANS-LIKE 4 [Jatropha curcas]
16 Hb_001102_090 0.1325084159 - - PREDICTED: mitogen-activated protein kinase 19 [Jatropha curcas]
17 Hb_001951_240 0.1330180591 - - PREDICTED: protein MEI2-like 5 [Jatropha curcas]
18 Hb_001514_240 0.1336835706 - - PREDICTED: aspartic proteinase CDR1 [Jatropha curcas]
19 Hb_005183_140 0.136524999 - - PREDICTED: protein WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT 1-like [Jatropha curcas]
20 Hb_000649_300 0.136997718 transcription factor TF Family: Tify JAZ9 [Hevea brasiliensis]

Gene co-expression network

sample Hb_000753_140 Hb_000753_140 Hb_000318_410 Hb_000318_410 Hb_000753_140--Hb_000318_410 Hb_002804_010 Hb_002804_010 Hb_000753_140--Hb_002804_010 Hb_000086_640 Hb_000086_640 Hb_000753_140--Hb_000086_640 Hb_001386_020 Hb_001386_020 Hb_000753_140--Hb_001386_020 Hb_015807_080 Hb_015807_080 Hb_000753_140--Hb_015807_080 Hb_132840_020 Hb_132840_020 Hb_000753_140--Hb_132840_020 Hb_033930_010 Hb_033930_010 Hb_000318_410--Hb_033930_010 Hb_000318_410--Hb_132840_020 Hb_000622_210 Hb_000622_210 Hb_000318_410--Hb_000622_210 Hb_002639_130 Hb_002639_130 Hb_000318_410--Hb_002639_130 Hb_000318_410--Hb_000086_640 Hb_005288_050 Hb_005288_050 Hb_002804_010--Hb_005288_050 Hb_002387_040 Hb_002387_040 Hb_002804_010--Hb_002387_040 Hb_000418_050 Hb_000418_050 Hb_002804_010--Hb_000418_050 Hb_024714_070 Hb_024714_070 Hb_002804_010--Hb_024714_070 Hb_001951_240 Hb_001951_240 Hb_002804_010--Hb_001951_240 Hb_000035_490 Hb_000035_490 Hb_000086_640--Hb_000035_490 Hb_000086_640--Hb_132840_020 Hb_000086_640--Hb_015807_080 Hb_000086_640--Hb_033930_010 Hb_005941_020 Hb_005941_020 Hb_000086_640--Hb_005941_020 Hb_001386_020--Hb_000086_640 Hb_001386_020--Hb_132840_020 Hb_001386_020--Hb_000035_490 Hb_002383_050 Hb_002383_050 Hb_001386_020--Hb_002383_050 Hb_011381_070 Hb_011381_070 Hb_001386_020--Hb_011381_070 Hb_008120_040 Hb_008120_040 Hb_015807_080--Hb_008120_040 Hb_004117_270 Hb_004117_270 Hb_015807_080--Hb_004117_270 Hb_104920_010 Hb_104920_010 Hb_015807_080--Hb_104920_010 Hb_015807_080--Hb_005941_020 Hb_001294_050 Hb_001294_050 Hb_132840_020--Hb_001294_050 Hb_048476_040 Hb_048476_040 Hb_132840_020--Hb_048476_040 Hb_132840_020--Hb_011381_070 Hb_001627_010 Hb_001627_010 Hb_132840_020--Hb_001627_010 Hb_000329_790 Hb_000329_790 Hb_132840_020--Hb_000329_790
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.38717 16.2322 11.0826 5.58004 1.51556 1.5393
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.51684 1.02841 1.43619 2.78094 8.48395

CAGE analysis