Hb_007101_270

Information

Type -
Description -
Location Contig7101: 146401-146733
Sequence    

Annotation

kegg
ID rcu:RCOM_0999080
description hypothetical protein
nr
ID XP_012080215.1
description PREDICTED: uncharacterized protein LOC105640496 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KRD9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08269 PE=4 SV=1
Gene Ontology
ID GO:0097159
description aspartic proteinase-like protein 2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007101_270 0.0 - - PREDICTED: uncharacterized protein LOC105640496 [Jatropha curcas]
2 Hb_005050_050 0.1148369044 - - PREDICTED: wall-associated receptor kinase 5-like [Glycine max]
3 Hb_003020_070 0.1353701464 - - PREDICTED: uncharacterized protein LOC103997323 [Musa acuminata subsp. malaccensis]
4 Hb_002890_160 0.139185939 - - PREDICTED: protein root UVB sensitive 6 isoform X1 [Jatropha curcas]
5 Hb_010683_070 0.145490919 - - PREDICTED: DNA (cytosine-5)-methyltransferase CMT2 isoform X1 [Jatropha curcas]
6 Hb_006789_030 0.1487349227 - - PREDICTED: wall-associated receptor kinase-like 22 [Prunus mume]
7 Hb_005486_020 0.152096376 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein HAT5 [Jatropha curcas]
8 Hb_007120_130 0.1521867726 - - conserved hypothetical protein [Ricinus communis]
9 Hb_003777_120 0.1533114537 - - -
10 Hb_001386_150 0.1537333902 - - leucine-rich repeat receptor protein kinase exs precursor, putative [Ricinus communis]
11 Hb_000062_050 0.1544887368 - - protein binding protein, putative [Ricinus communis]
12 Hb_000199_040 0.1565808038 desease resistance Gene Name: TIR PREDICTED: TMV resistance protein N-like isoform X1 [Jatropha curcas]
13 Hb_003531_050 0.1599607968 - - PREDICTED: pyridoxal reductase, chloroplastic [Jatropha curcas]
14 Hb_000037_200 0.1610107705 - - RNA binding protein, putative [Ricinus communis]
15 Hb_003337_020 0.1611685637 - - PREDICTED: uncharacterized protein LOC105116455 [Populus euphratica]
16 Hb_014068_010 0.1619786998 - - PREDICTED: phototropin-1 [Jatropha curcas]
17 Hb_000185_170 0.1631698063 - - ATP binding protein, putative [Ricinus communis]
18 Hb_002053_180 0.1648121232 - - PREDICTED: probable inactive receptor kinase At2g26730 [Jatropha curcas]
19 Hb_000265_170 0.165274114 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance protein RPM1-like isoform X1 [Populus euphratica]
20 Hb_007237_020 0.1653757761 - - PREDICTED: protein trichome birefringence-like 23 [Jatropha curcas]

Gene co-expression network

sample Hb_007101_270 Hb_007101_270 Hb_005050_050 Hb_005050_050 Hb_007101_270--Hb_005050_050 Hb_003020_070 Hb_003020_070 Hb_007101_270--Hb_003020_070 Hb_002890_160 Hb_002890_160 Hb_007101_270--Hb_002890_160 Hb_010683_070 Hb_010683_070 Hb_007101_270--Hb_010683_070 Hb_006789_030 Hb_006789_030 Hb_007101_270--Hb_006789_030 Hb_005486_020 Hb_005486_020 Hb_007101_270--Hb_005486_020 Hb_005050_050--Hb_003020_070 Hb_001386_150 Hb_001386_150 Hb_005050_050--Hb_001386_150 Hb_000212_270 Hb_000212_270 Hb_005050_050--Hb_000212_270 Hb_005050_050--Hb_002890_160 Hb_005050_050--Hb_010683_070 Hb_003020_070--Hb_002890_160 Hb_014068_010 Hb_014068_010 Hb_003020_070--Hb_014068_010 Hb_003020_070--Hb_000212_270 Hb_003531_050 Hb_003531_050 Hb_003020_070--Hb_003531_050 Hb_001352_030 Hb_001352_030 Hb_003020_070--Hb_001352_030 Hb_001898_100 Hb_001898_100 Hb_003020_070--Hb_001898_100 Hb_002890_160--Hb_003531_050 Hb_002890_160--Hb_001352_030 Hb_010534_040 Hb_010534_040 Hb_002890_160--Hb_010534_040 Hb_000037_200 Hb_000037_200 Hb_002890_160--Hb_000037_200 Hb_000922_160 Hb_000922_160 Hb_002890_160--Hb_000922_160 Hb_004218_050 Hb_004218_050 Hb_010683_070--Hb_004218_050 Hb_004223_170 Hb_004223_170 Hb_010683_070--Hb_004223_170 Hb_001579_190 Hb_001579_190 Hb_010683_070--Hb_001579_190 Hb_007952_050 Hb_007952_050 Hb_010683_070--Hb_007952_050 Hb_010863_030 Hb_010863_030 Hb_010683_070--Hb_010863_030 Hb_031685_010 Hb_031685_010 Hb_006789_030--Hb_031685_010 Hb_010407_150 Hb_010407_150 Hb_006789_030--Hb_010407_150 Hb_029095_010 Hb_029095_010 Hb_006789_030--Hb_029095_010 Hb_001544_060 Hb_001544_060 Hb_006789_030--Hb_001544_060 Hb_034585_070 Hb_034585_070 Hb_006789_030--Hb_034585_070 Hb_006789_030--Hb_001898_100 Hb_000990_040 Hb_000990_040 Hb_005486_020--Hb_000990_040 Hb_005486_020--Hb_029095_010 Hb_005486_020--Hb_001352_030 Hb_002596_090 Hb_002596_090 Hb_005486_020--Hb_002596_090 Hb_093364_010 Hb_093364_010 Hb_005486_020--Hb_093364_010 Hb_111997_010 Hb_111997_010 Hb_005486_020--Hb_111997_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.40848 1.37908 6.13533 1.87228 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.932189 2.62045

CAGE analysis