Hb_007952_050

Information

Type -
Description -
Location Contig7952: 70775-77403
Sequence    

Annotation

kegg
ID rcu:RCOM_1264020
description Bipolar kinesin KRP-130, putative
nr
ID XP_012064936.1
description PREDICTED: 125 kDa kinesin-related protein-like [Jatropha curcas]
swissprot
ID O23826
description 125 kDa kinesin-related protein OS=Nicotiana tabacum GN=TKRP125 PE=1 SV=1
trembl
ID A0A067L6R9
description Kinesin-like protein OS=Jatropha curcas GN=JCGZ_05623 PE=3 SV=1
Gene Ontology
ID GO:0005871
description 125 kda kinesin-related

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_58526: 71049-73547 , PASA_asmbl_58527: 73218-76872
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007952_050 0.0 - - PREDICTED: 125 kDa kinesin-related protein-like [Jatropha curcas]
2 Hb_012055_080 0.1240334677 - - PREDICTED: lysine-rich arabinogalactan protein 18-like [Jatropha curcas]
3 Hb_002374_470 0.1377521211 - - PREDICTED: filament-like plant protein isoform X2 [Jatropha curcas]
4 Hb_008705_030 0.1385534989 - - hypothetical protein JCGZ_13017 [Jatropha curcas]
5 Hb_004218_050 0.1398325994 - - annexin [Manihot esculenta]
6 Hb_010683_070 0.1414227259 - - PREDICTED: DNA (cytosine-5)-methyltransferase CMT2 isoform X1 [Jatropha curcas]
7 Hb_000283_030 0.1420413419 transcription factor TF Family: AUX/IAA PREDICTED: auxin-responsive protein IAA16-like [Populus euphratica]
8 Hb_103474_010 0.1570592169 - - serine/threonine protein kinase, putative [Ricinus communis]
9 Hb_021346_050 0.1571770096 - - xylulose kinase, putative [Ricinus communis]
10 Hb_007943_180 0.1573381709 - - PREDICTED: uncharacterized protein LOC105637734 [Jatropha curcas]
11 Hb_001517_070 0.1608662943 - - protein with unknown function [Ricinus communis]
12 Hb_002540_060 0.1651133816 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH48 isoform X2 [Jatropha curcas]
13 Hb_000925_150 0.1655194043 - - PREDICTED: aluminum-activated malate transporter 8-like [Jatropha curcas]
14 Hb_126933_020 0.1660815412 - - PREDICTED: uncharacterized protein LOC105638525 [Jatropha curcas]
15 Hb_004223_170 0.1671500987 - - PREDICTED: ATP sulfurylase 2 [Jatropha curcas]
16 Hb_027684_010 0.1686592515 - - hypothetical protein RCOM_0504250 [Ricinus communis]
17 Hb_007574_020 0.1696065198 - - PREDICTED: uncharacterized protein LOC105638146 [Jatropha curcas]
18 Hb_003935_090 0.1722664777 - - PREDICTED: uncharacterized protein At4g38062 [Jatropha curcas]
19 Hb_003020_190 0.1755091224 - - PREDICTED: methylsterol monooxygenase 2-2 [Jatropha curcas]
20 Hb_002999_030 0.1762853187 - - PREDICTED: beta-1,3-galactosyltransferase 15 [Jatropha curcas]

Gene co-expression network

sample Hb_007952_050 Hb_007952_050 Hb_012055_080 Hb_012055_080 Hb_007952_050--Hb_012055_080 Hb_002374_470 Hb_002374_470 Hb_007952_050--Hb_002374_470 Hb_008705_030 Hb_008705_030 Hb_007952_050--Hb_008705_030 Hb_004218_050 Hb_004218_050 Hb_007952_050--Hb_004218_050 Hb_010683_070 Hb_010683_070 Hb_007952_050--Hb_010683_070 Hb_000283_030 Hb_000283_030 Hb_007952_050--Hb_000283_030 Hb_003935_090 Hb_003935_090 Hb_012055_080--Hb_003935_090 Hb_011033_010 Hb_011033_010 Hb_012055_080--Hb_011033_010 Hb_007574_020 Hb_007574_020 Hb_012055_080--Hb_007574_020 Hb_012055_080--Hb_004218_050 Hb_000925_150 Hb_000925_150 Hb_012055_080--Hb_000925_150 Hb_001511_210 Hb_001511_210 Hb_002374_470--Hb_001511_210 Hb_011671_050 Hb_011671_050 Hb_002374_470--Hb_011671_050 Hb_027684_010 Hb_027684_010 Hb_002374_470--Hb_027684_010 Hb_019613_030 Hb_019613_030 Hb_002374_470--Hb_019613_030 Hb_002066_100 Hb_002066_100 Hb_002374_470--Hb_002066_100 Hb_002518_040 Hb_002518_040 Hb_002374_470--Hb_002518_040 Hb_174168_010 Hb_174168_010 Hb_008705_030--Hb_174168_010 Hb_019570_010 Hb_019570_010 Hb_008705_030--Hb_019570_010 Hb_001348_040 Hb_001348_040 Hb_008705_030--Hb_001348_040 Hb_004218_140 Hb_004218_140 Hb_008705_030--Hb_004218_140 Hb_001369_460 Hb_001369_460 Hb_008705_030--Hb_001369_460 Hb_004602_010 Hb_004602_010 Hb_008705_030--Hb_004602_010 Hb_002942_120 Hb_002942_120 Hb_004218_050--Hb_002942_120 Hb_024973_020 Hb_024973_020 Hb_004218_050--Hb_024973_020 Hb_004218_050--Hb_010683_070 Hb_012653_010 Hb_012653_010 Hb_004218_050--Hb_012653_010 Hb_001343_120 Hb_001343_120 Hb_004218_050--Hb_001343_120 Hb_004223_170 Hb_004223_170 Hb_004218_050--Hb_004223_170 Hb_010683_070--Hb_004223_170 Hb_001579_190 Hb_001579_190 Hb_010683_070--Hb_001579_190 Hb_010863_030 Hb_010863_030 Hb_010683_070--Hb_010863_030 Hb_007101_270 Hb_007101_270 Hb_010683_070--Hb_007101_270 Hb_103474_010 Hb_103474_010 Hb_000283_030--Hb_103474_010 Hb_000392_260 Hb_000392_260 Hb_000283_030--Hb_000392_260 Hb_000976_400 Hb_000976_400 Hb_000283_030--Hb_000976_400 Hb_006816_250 Hb_006816_250 Hb_000283_030--Hb_006816_250 Hb_003416_020 Hb_003416_020 Hb_000283_030--Hb_003416_020 Hb_001517_070 Hb_001517_070 Hb_000283_030--Hb_001517_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.845501 0.910969 21.7225 7.38042 1.40692 0.304299
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.114169 0.0179693 0.379387 2.92581 9.04293

CAGE analysis