Hb_014497_030

Information

Type -
Description -
Location Contig14497: 31847-38776
Sequence    

Annotation

kegg
ID rcu:RCOM_1602300
description bubr1, putative
nr
ID XP_012073546.1
description PREDICTED: mitotic spindle checkpoint protein BUBR1 [Jatropha curcas]
swissprot
ID O22806
description Mitotic spindle checkpoint protein BUBR1 OS=Arabidopsis thaliana GN=BUBR1 PE=1 SV=2
trembl
ID A0A067KP40
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08019 PE=4 SV=1
Gene Ontology
ID GO:0016301
description mitotic spindle checkpoint protein bubr1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_11692: 23217-31226 , PASA_asmbl_11694: 33611-38661 , PASA_asmbl_11695: 33837-38661
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_014497_030 0.0 - - PREDICTED: mitotic spindle checkpoint protein BUBR1 [Jatropha curcas]
2 Hb_000189_390 0.1280873864 - - PREDICTED: pollen-specific protein SF21-like isoform X1 [Jatropha curcas]
3 Hb_000803_090 0.1323839716 - - PREDICTED: transcription initiation factor IIB isoform X1 [Jatropha curcas]
4 Hb_011609_010 0.1527294178 - - PREDICTED: zinc transporter 5 [Jatropha curcas]
5 Hb_001776_200 0.1599029183 - - PREDICTED: COP9 signalosome complex subunit 2 isoform X2 [Pyrus x bretschneideri]
6 Hb_002301_210 0.1670071342 - - PREDICTED: receptor-like protein kinase At5g59670 isoform X2 [Jatropha curcas]
7 Hb_076233_030 0.1689404482 - - PREDICTED: phosphoserine phosphatase, chloroplastic [Jatropha curcas]
8 Hb_003747_050 0.1770442691 - - PREDICTED: WD repeat-containing protein LWD1 [Jatropha curcas]
9 Hb_000317_190 0.1784017909 - - PREDICTED: diacylglycerol kinase 5-like [Jatropha curcas]
10 Hb_124951_010 0.179610534 - - chitinase-like protein [Hevea brasiliensis]
11 Hb_000008_390 0.1809127554 - - PREDICTED: protein disulfide isomerase-like 1-4 [Jatropha curcas]
12 Hb_000058_050 0.1827263304 - - PREDICTED: uncharacterized protein LOC105640877 [Jatropha curcas]
13 Hb_002600_130 0.1836891958 - - PREDICTED: uncharacterized protein LOC105646808 [Jatropha curcas]
14 Hb_001414_050 0.1854850032 - - PREDICTED: probable S-adenosylmethionine-dependent methyltransferase At5g37970 [Jatropha curcas]
15 Hb_001114_020 0.1924806895 desease resistance Gene Name: LRR_4 Disease resistance protein RPM1, putative [Ricinus communis]
16 Hb_001269_510 0.1929467031 - - Cyclic nucleotide-gated ion channel, putative [Ricinus communis]
17 Hb_003529_180 0.1941861768 - - hypothetical protein JCGZ_00222 [Jatropha curcas]
18 Hb_001102_190 0.1952934481 - - PREDICTED: uncharacterized protein LOC105112724 [Populus euphratica]
19 Hb_001624_040 0.1956030151 - - PREDICTED: ubiquitin carboxyl-terminal hydrolase 5 isoform X1 [Jatropha curcas]
20 Hb_075203_010 0.1957847954 - - PREDICTED: calcium-dependent protein kinase SK5 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_014497_030 Hb_014497_030 Hb_000189_390 Hb_000189_390 Hb_014497_030--Hb_000189_390 Hb_000803_090 Hb_000803_090 Hb_014497_030--Hb_000803_090 Hb_011609_010 Hb_011609_010 Hb_014497_030--Hb_011609_010 Hb_001776_200 Hb_001776_200 Hb_014497_030--Hb_001776_200 Hb_002301_210 Hb_002301_210 Hb_014497_030--Hb_002301_210 Hb_076233_030 Hb_076233_030 Hb_014497_030--Hb_076233_030 Hb_000189_390--Hb_076233_030 Hb_000189_390--Hb_000803_090 Hb_000189_390--Hb_011609_010 Hb_003529_180 Hb_003529_180 Hb_000189_390--Hb_003529_180 Hb_124951_010 Hb_124951_010 Hb_000189_390--Hb_124951_010 Hb_000803_090--Hb_011609_010 Hb_003747_050 Hb_003747_050 Hb_000803_090--Hb_003747_050 Hb_000008_390 Hb_000008_390 Hb_000803_090--Hb_000008_390 Hb_001624_040 Hb_001624_040 Hb_000803_090--Hb_001624_040 Hb_000803_090--Hb_002301_210 Hb_000631_090 Hb_000631_090 Hb_000803_090--Hb_000631_090 Hb_011609_010--Hb_001624_040 Hb_011609_010--Hb_000008_390 Hb_001621_110 Hb_001621_110 Hb_011609_010--Hb_001621_110 Hb_000062_360 Hb_000062_360 Hb_011609_010--Hb_000062_360 Hb_011609_010--Hb_003529_180 Hb_011671_110 Hb_011671_110 Hb_001776_200--Hb_011671_110 Hb_001414_050 Hb_001414_050 Hb_001776_200--Hb_001414_050 Hb_047442_010 Hb_047442_010 Hb_001776_200--Hb_047442_010 Hb_005394_010 Hb_005394_010 Hb_001776_200--Hb_005394_010 Hb_002609_190 Hb_002609_190 Hb_001776_200--Hb_002609_190 Hb_001894_160 Hb_001894_160 Hb_001776_200--Hb_001894_160 Hb_002301_210--Hb_001624_040 Hb_001250_040 Hb_001250_040 Hb_002301_210--Hb_001250_040 Hb_001689_050 Hb_001689_050 Hb_002301_210--Hb_001689_050 Hb_000076_090 Hb_000076_090 Hb_002301_210--Hb_000076_090 Hb_003894_060 Hb_003894_060 Hb_002301_210--Hb_003894_060 Hb_076233_030--Hb_000803_090 Hb_002030_120 Hb_002030_120 Hb_076233_030--Hb_002030_120 Hb_002960_110 Hb_002960_110 Hb_076233_030--Hb_002960_110 Hb_076233_030--Hb_003529_180
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.05658 11.0658 25.9778 6.98339 6.14723 6.69721
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.661635 0.244035 0.0618284 4.40463 3.72158

CAGE analysis