Hb_001689_050

Information

Type -
Description -
Location Contig1689: 94006-104728
Sequence    

Annotation

kegg
ID pmum:103341998
description cytochrome P450 CYP749A22-like
nr
ID XP_008243777.1
description PREDICTED: cytochrome P450 CYP749A22-like [Prunus mume]
swissprot
ID O48786
description Cytochrome P450 734A1 OS=Arabidopsis thaliana GN=CYP734A1 PE=2 SV=1
trembl
ID A0A0E0C4Y6
description Uncharacterized protein OS=Oryza meridionalis PE=4 SV=1
Gene Ontology
ID GO:0005506
description cytochrome p450 734a1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_15664: 99149-101681 , PASA_asmbl_15665: 99043-99526
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001689_050 0.0 - - PREDICTED: cytochrome P450 CYP749A22-like [Prunus mume]
2 Hb_001250_040 0.0878379314 - - hypothetical protein CISIN_1g018444mg [Citrus sinensis]
3 Hb_003683_030 0.0889430331 - - PREDICTED: uridine-cytidine kinase C isoform X1 [Jatropha curcas]
4 Hb_007594_080 0.0923040433 - - PREDICTED: polygalacturonate 4-alpha-galacturonosyltransferase [Jatropha curcas]
5 Hb_003894_060 0.1141267874 - - conserved hypothetical protein [Ricinus communis]
6 Hb_004837_210 0.1168995847 - - PREDICTED: calcium-dependent protein kinase 8-like [Jatropha curcas]
7 Hb_001953_100 0.1210970312 - - PREDICTED: glutamate-1-semialdehyde 2,1-aminomutase 2, chloroplastic [Jatropha curcas]
8 Hb_003175_070 0.1217162745 - - pyrophosphate-dependent phosphofructokinase, partial [Hevea brasiliensis]
9 Hb_002447_050 0.1221246806 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
10 Hb_001663_130 0.1243899522 - - acyl-CoA thioesterase, putative [Ricinus communis]
11 Hb_007894_190 0.1249934158 - - PREDICTED: uncharacterized protein LOC105632935 [Jatropha curcas]
12 Hb_002301_210 0.125082651 - - PREDICTED: receptor-like protein kinase At5g59670 isoform X2 [Jatropha curcas]
13 Hb_173660_010 0.125676138 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Malus domestica]
14 Hb_000093_140 0.1257116219 - - PREDICTED: fructokinase-like 2, chloroplastic [Jatropha curcas]
15 Hb_000035_210 0.1291394506 - - PREDICTED: BTB/POZ domain-containing protein NPY1 [Jatropha curcas]
16 Hb_000042_050 0.1300059871 - - PREDICTED: uncharacterized protein LOC105632791 isoform X1 [Jatropha curcas]
17 Hb_000749_200 0.1317494039 - - PREDICTED: plant intracellular Ras-group-related LRR protein 6 isoform X1 [Jatropha curcas]
18 Hb_005074_050 0.1334683614 - - PREDICTED: myosin-6-like [Jatropha curcas]
19 Hb_004346_040 0.1344476918 - - hypothetical protein POPTR_0016s06630g [Populus trichocarpa]
20 Hb_005214_070 0.1352414311 - - PREDICTED: fatty acid amide hydrolase [Jatropha curcas]

Gene co-expression network

sample Hb_001689_050 Hb_001689_050 Hb_001250_040 Hb_001250_040 Hb_001689_050--Hb_001250_040 Hb_003683_030 Hb_003683_030 Hb_001689_050--Hb_003683_030 Hb_007594_080 Hb_007594_080 Hb_001689_050--Hb_007594_080 Hb_003894_060 Hb_003894_060 Hb_001689_050--Hb_003894_060 Hb_004837_210 Hb_004837_210 Hb_001689_050--Hb_004837_210 Hb_001953_100 Hb_001953_100 Hb_001689_050--Hb_001953_100 Hb_001250_040--Hb_003683_030 Hb_000136_020 Hb_000136_020 Hb_001250_040--Hb_000136_020 Hb_001571_030 Hb_001571_030 Hb_001250_040--Hb_001571_030 Hb_001250_040--Hb_007594_080 Hb_001624_040 Hb_001624_040 Hb_001250_040--Hb_001624_040 Hb_000749_200 Hb_000749_200 Hb_003683_030--Hb_000749_200 Hb_003683_030--Hb_003894_060 Hb_003683_030--Hb_004837_210 Hb_003683_030--Hb_001953_100 Hb_001279_020 Hb_001279_020 Hb_007594_080--Hb_001279_020 Hb_010620_050 Hb_010620_050 Hb_007594_080--Hb_010620_050 Hb_001663_130 Hb_001663_130 Hb_007594_080--Hb_001663_130 Hb_000302_190 Hb_000302_190 Hb_007594_080--Hb_000302_190 Hb_000529_130 Hb_000529_130 Hb_007594_080--Hb_000529_130 Hb_003894_060--Hb_001663_130 Hb_005214_070 Hb_005214_070 Hb_003894_060--Hb_005214_070 Hb_000093_140 Hb_000093_140 Hb_003894_060--Hb_000093_140 Hb_001001_090 Hb_001001_090 Hb_003894_060--Hb_001001_090 Hb_002432_050 Hb_002432_050 Hb_003894_060--Hb_002432_050 Hb_148146_010 Hb_148146_010 Hb_004837_210--Hb_148146_010 Hb_000094_100 Hb_000094_100 Hb_004837_210--Hb_000094_100 Hb_012779_080 Hb_012779_080 Hb_004837_210--Hb_012779_080 Hb_002928_030 Hb_002928_030 Hb_004837_210--Hb_002928_030 Hb_005074_050 Hb_005074_050 Hb_004837_210--Hb_005074_050 Hb_000009_020 Hb_000009_020 Hb_001953_100--Hb_000009_020 Hb_000056_310 Hb_000056_310 Hb_001953_100--Hb_000056_310 Hb_001953_100--Hb_148146_010 Hb_001953_100--Hb_004837_210 Hb_000035_210 Hb_000035_210 Hb_001953_100--Hb_000035_210
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.61106 1.47711 4.30927 1.81793 0.904478 0.699212
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.134256 0.0975283 0.390448 0.627592 3.32856

CAGE analysis