Hb_000093_140

Information

Type -
Description -
Location Contig93: 167441-174269
Sequence    

Annotation

kegg
ID rcu:RCOM_1620230
description fructokinase, putative (EC:2.7.1.4)
nr
ID XP_012067810.1
description PREDICTED: fructokinase-like 2, chloroplastic [Jatropha curcas]
swissprot
ID F4I0K2
description Fructokinase-like 2, chloroplastic OS=Arabidopsis thaliana GN=FLN2 PE=1 SV=2
trembl
ID A0A067LB47
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15731 PE=4 SV=1
Gene Ontology
ID GO:0009295
description fructokinase-like chloroplastic

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_62819: 164819-166909 , PASA_asmbl_62821: 167465-174261
cDNA
(Sanger)
(ID:Location)		 012_H17.ab1: 165040-166807

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000093_140 0.0 - - PREDICTED: fructokinase-like 2, chloroplastic [Jatropha curcas]
2 Hb_004346_040 0.0802061267 - - hypothetical protein POPTR_0016s06630g [Populus trichocarpa]
3 Hb_003894_060 0.1057667419 - - conserved hypothetical protein [Ricinus communis]
4 Hb_003055_070 0.1069545927 - - PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog isoform X1 [Jatropha curcas]
5 Hb_007765_130 0.11006291 - - PREDICTED: UPF0503 protein At3g09070, chloroplastic [Jatropha curcas]
6 Hb_005214_070 0.1172281677 - - PREDICTED: fatty acid amide hydrolase [Jatropha curcas]
7 Hb_004324_120 0.1176300487 - - ATP-dependent zinc metalloprotease YME1L1 [Gossypium arboreum]
8 Hb_012539_040 0.1198324709 transcription factor TF Family: CPP hypothetical protein JCGZ_07765 [Jatropha curcas]
9 Hb_000446_040 0.1225154756 - - PREDICTED: uncharacterized protein ycf45 [Jatropha curcas]
10 Hb_001689_050 0.1257116219 - - PREDICTED: cytochrome P450 CYP749A22-like [Prunus mume]
11 Hb_005015_020 0.1261978648 desease resistance Gene Name: ABC_tran ABC transporter family protein [Hevea brasiliensis]
12 Hb_003683_030 0.1285939465 - - PREDICTED: uridine-cytidine kinase C isoform X1 [Jatropha curcas]
13 Hb_001953_100 0.128681253 - - PREDICTED: glutamate-1-semialdehyde 2,1-aminomutase 2, chloroplastic [Jatropha curcas]
14 Hb_005288_180 0.1348804165 - - PREDICTED: pentatricopeptide repeat-containing protein At3g04760, chloroplastic isoform X1 [Jatropha curcas]
15 Hb_000042_050 0.135346157 - - PREDICTED: uncharacterized protein LOC105632791 isoform X1 [Jatropha curcas]
16 Hb_013968_010 0.1353675233 - - PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp3 [Jatropha curcas]
17 Hb_002447_050 0.136648111 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
18 Hb_004837_210 0.1366498393 - - PREDICTED: calcium-dependent protein kinase 8-like [Jatropha curcas]
19 Hb_002432_050 0.1399065059 - - PREDICTED: uncharacterized protein LOC105648523 [Jatropha curcas]
20 Hb_000906_070 0.1400706116 - - PREDICTED: protein SCAR2-like isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_000093_140 Hb_000093_140 Hb_004346_040 Hb_004346_040 Hb_000093_140--Hb_004346_040 Hb_003894_060 Hb_003894_060 Hb_000093_140--Hb_003894_060 Hb_003055_070 Hb_003055_070 Hb_000093_140--Hb_003055_070 Hb_007765_130 Hb_007765_130 Hb_000093_140--Hb_007765_130 Hb_005214_070 Hb_005214_070 Hb_000093_140--Hb_005214_070 Hb_004324_120 Hb_004324_120 Hb_000093_140--Hb_004324_120 Hb_000906_070 Hb_000906_070 Hb_004346_040--Hb_000906_070 Hb_005015_020 Hb_005015_020 Hb_004346_040--Hb_005015_020 Hb_013968_010 Hb_013968_010 Hb_004346_040--Hb_013968_010 Hb_004346_040--Hb_004324_120 Hb_002447_050 Hb_002447_050 Hb_004346_040--Hb_002447_050 Hb_001663_130 Hb_001663_130 Hb_003894_060--Hb_001663_130 Hb_003683_030 Hb_003683_030 Hb_003894_060--Hb_003683_030 Hb_003894_060--Hb_005214_070 Hb_001001_090 Hb_001001_090 Hb_003894_060--Hb_001001_090 Hb_002432_050 Hb_002432_050 Hb_003894_060--Hb_002432_050 Hb_000940_030 Hb_000940_030 Hb_003055_070--Hb_000940_030 Hb_003055_070--Hb_007765_130 Hb_000446_040 Hb_000446_040 Hb_003055_070--Hb_000446_040 Hb_000005_100 Hb_000005_100 Hb_003055_070--Hb_000005_100 Hb_004223_270 Hb_004223_270 Hb_003055_070--Hb_004223_270 Hb_000042_050 Hb_000042_050 Hb_007765_130--Hb_000042_050 Hb_001365_030 Hb_001365_030 Hb_007765_130--Hb_001365_030 Hb_007765_130--Hb_000005_100 Hb_000679_080 Hb_000679_080 Hb_007765_130--Hb_000679_080 Hb_005214_070--Hb_001001_090 Hb_007290_070 Hb_007290_070 Hb_005214_070--Hb_007290_070 Hb_000649_330 Hb_000649_330 Hb_005214_070--Hb_000649_330 Hb_005214_070--Hb_001663_130 Hb_000748_110 Hb_000748_110 Hb_005214_070--Hb_000748_110 Hb_004324_120--Hb_005015_020 Hb_012539_040 Hb_012539_040 Hb_004324_120--Hb_012539_040 Hb_005288_180 Hb_005288_180 Hb_004324_120--Hb_005288_180 Hb_137600_010 Hb_137600_010 Hb_004324_120--Hb_137600_010 Hb_004324_120--Hb_000446_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.76305 5.63967 12.1193 4.40013 0.867558 1.7917
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.321073 0.437899 0.479675 2.77282 11.1561

CAGE analysis