Hb_000008_390

Information

Type -
Description -
Location Contig8: 468897-473378
Sequence    

Annotation

kegg
ID rcu:RCOM_0154150
description protein disulfide isomerase, putative (EC:2.4.1.119)
nr
ID XP_012064825.1
description PREDICTED: protein disulfide isomerase-like 1-4 [Jatropha curcas]
swissprot
ID Q9FF55
description Protein disulfide isomerase-like 1-4 OS=Arabidopsis thaliana GN=PDIL1-4 PE=1 SV=1
trembl
ID A0A067LHH9
description Protein disulfide-isomerase OS=Jatropha curcas GN=JCGZ_05522 PE=3 SV=1
Gene Ontology
ID GO:0005783
description protein disulfide isomerase-like 1-4

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_58702: 469145-473355
cDNA
(Sanger)
(ID:Location)		 020_B22.ab1: 469162-470792 , 029_I11.ab1: 469162-469601 , 049_H10.ab1: 469162-470023

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000008_390 0.0 - - PREDICTED: protein disulfide isomerase-like 1-4 [Jatropha curcas]
2 Hb_000086_180 0.0868492636 - - hypothetical protein JCGZ_17674 [Jatropha curcas]
3 Hb_011609_010 0.1052031284 - - PREDICTED: zinc transporter 5 [Jatropha curcas]
4 Hb_000803_090 0.1109534954 - - PREDICTED: transcription initiation factor IIB isoform X1 [Jatropha curcas]
5 Hb_006935_040 0.1184039922 - - PREDICTED: uncharacterized protein LOC105629236 [Jatropha curcas]
6 Hb_000959_190 0.1187663927 - - PREDICTED: crossover junction endonuclease EME1B-like [Jatropha curcas]
7 Hb_001021_100 0.1298821114 - - PREDICTED: wee1-like protein kinase [Jatropha curcas]
8 Hb_015026_020 0.1320974573 transcription factor TF Family: B3 PREDICTED: B3 domain-containing protein Os07g0563300 [Jatropha curcas]
9 Hb_001414_050 0.1331064092 - - PREDICTED: probable S-adenosylmethionine-dependent methyltransferase At5g37970 [Jatropha curcas]
10 Hb_001160_110 0.1333785091 - - PREDICTED: kinesin-related protein 13 [Jatropha curcas]
11 Hb_000890_020 0.1365970556 - - Flavonol synthase/flavanone 3-hydroxylase, putative [Ricinus communis]
12 Hb_011671_110 0.1382380949 - - PREDICTED: uncharacterized protein LOC105648628 [Jatropha curcas]
13 Hb_012787_030 0.1384739227 - - PREDICTED: dnaJ homolog subfamily B member 1 [Jatropha curcas]
14 Hb_003106_200 0.1413121111 - - PREDICTED: uncharacterized protein LOC105640430 isoform X1 [Jatropha curcas]
15 Hb_003747_050 0.1427014585 - - PREDICTED: WD repeat-containing protein LWD1 [Jatropha curcas]
16 Hb_000032_200 0.1433883592 - - PREDICTED: probable polygalacturonase [Jatropha curcas]
17 Hb_002249_170 0.1436983985 - - copine, putative [Ricinus communis]
18 Hb_004957_020 0.1458473375 - - conserved hypothetical protein [Ricinus communis]
19 Hb_000120_350 0.1475757243 - - PREDICTED: uncharacterized protein LOC104422872 isoform X1 [Eucalyptus grandis]
20 Hb_001663_130 0.1488334345 - - acyl-CoA thioesterase, putative [Ricinus communis]

Gene co-expression network

sample Hb_000008_390 Hb_000008_390 Hb_000086_180 Hb_000086_180 Hb_000008_390--Hb_000086_180 Hb_011609_010 Hb_011609_010 Hb_000008_390--Hb_011609_010 Hb_000803_090 Hb_000803_090 Hb_000008_390--Hb_000803_090 Hb_006935_040 Hb_006935_040 Hb_000008_390--Hb_006935_040 Hb_000959_190 Hb_000959_190 Hb_000008_390--Hb_000959_190 Hb_001021_100 Hb_001021_100 Hb_000008_390--Hb_001021_100 Hb_001488_290 Hb_001488_290 Hb_000086_180--Hb_001488_290 Hb_001160_110 Hb_001160_110 Hb_000086_180--Hb_001160_110 Hb_000032_410 Hb_000032_410 Hb_000086_180--Hb_000032_410 Hb_001663_130 Hb_001663_130 Hb_000086_180--Hb_001663_130 Hb_000649_330 Hb_000649_330 Hb_000086_180--Hb_000649_330 Hb_011609_010--Hb_000803_090 Hb_001624_040 Hb_001624_040 Hb_011609_010--Hb_001624_040 Hb_001621_110 Hb_001621_110 Hb_011609_010--Hb_001621_110 Hb_000062_360 Hb_000062_360 Hb_011609_010--Hb_000062_360 Hb_003529_180 Hb_003529_180 Hb_011609_010--Hb_003529_180 Hb_003747_050 Hb_003747_050 Hb_000803_090--Hb_003747_050 Hb_000803_090--Hb_001624_040 Hb_002301_210 Hb_002301_210 Hb_000803_090--Hb_002301_210 Hb_000631_090 Hb_000631_090 Hb_000803_090--Hb_000631_090 Hb_000928_250 Hb_000928_250 Hb_006935_040--Hb_000928_250 Hb_001894_160 Hb_001894_160 Hb_006935_040--Hb_001894_160 Hb_015026_020 Hb_015026_020 Hb_006935_040--Hb_015026_020 Hb_003106_200 Hb_003106_200 Hb_006935_040--Hb_003106_200 Hb_001414_050 Hb_001414_050 Hb_006935_040--Hb_001414_050 Hb_000732_030 Hb_000732_030 Hb_000959_190--Hb_000732_030 Hb_001123_110 Hb_001123_110 Hb_000959_190--Hb_001123_110 Hb_000120_350 Hb_000120_350 Hb_000959_190--Hb_000120_350 Hb_000640_050 Hb_000640_050 Hb_000959_190--Hb_000640_050 Hb_004957_020 Hb_004957_020 Hb_000959_190--Hb_004957_020 Hb_000035_490 Hb_000035_490 Hb_001021_100--Hb_000035_490 Hb_001863_340 Hb_001863_340 Hb_001021_100--Hb_001863_340 Hb_011381_070 Hb_011381_070 Hb_001021_100--Hb_011381_070 Hb_011671_110 Hb_011671_110 Hb_001021_100--Hb_011671_110 Hb_005214_070 Hb_005214_070 Hb_001021_100--Hb_005214_070 Hb_001021_100--Hb_015026_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
21.4507 52.564 162.838 62.9374 29.0904 14.4005
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
5.69363 8.88564 8.61404 25.7206 35.7514

CAGE analysis