Hb_001414_050

Information

Type -
Description -
Location Contig1414: 45707-46792
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa002513mg
description hypothetical protein
nr
ID XP_012072504.1
description PREDICTED: probable S-adenosylmethionine-dependent methyltransferase At5g37970 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID M5X0C4
description Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa002513mg PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001414_050 0.0 - - PREDICTED: probable S-adenosylmethionine-dependent methyltransferase At5g37970 [Jatropha curcas]
2 Hb_001776_200 0.1092289301 - - PREDICTED: COP9 signalosome complex subunit 2 isoform X2 [Pyrus x bretschneideri]
3 Hb_006935_040 0.1244115147 - - PREDICTED: uncharacterized protein LOC105629236 [Jatropha curcas]
4 Hb_000008_390 0.1331064092 - - PREDICTED: protein disulfide isomerase-like 1-4 [Jatropha curcas]
5 Hb_011671_280 0.1345103889 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF106-like [Populus euphratica]
6 Hb_031821_010 0.1402458496 - - ccd1, putative [Ricinus communis]
7 Hb_002965_080 0.1447305393 transcription factor TF Family: C2C2-GATA PREDICTED: GATA transcription factor 15-like [Jatropha curcas]
8 Hb_025905_010 0.1449256926 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO1 [Jatropha curcas]
9 Hb_011671_110 0.1504880086 - - PREDICTED: uncharacterized protein LOC105648628 [Jatropha curcas]
10 Hb_000390_020 0.1545374207 transcription factor TF Family: GRF PREDICTED: growth-regulating factor 4-like [Jatropha curcas]
11 Hb_001863_340 0.1586378845 - - PREDICTED: probable pectin methyltransferase QUA2 [Jatropha curcas]
12 Hb_000803_090 0.1597495909 - - PREDICTED: transcription initiation factor IIB isoform X1 [Jatropha curcas]
13 Hb_011609_010 0.1605615832 - - PREDICTED: zinc transporter 5 [Jatropha curcas]
14 Hb_000120_350 0.1626672727 - - PREDICTED: uncharacterized protein LOC104422872 isoform X1 [Eucalyptus grandis]
15 Hb_000077_210 0.1627883374 - - PREDICTED: E3 ubiquitin-protein ligase RMA1H1 [Jatropha curcas]
16 Hb_010315_100 0.1656938324 - - PREDICTED: uncharacterized protein LOC104420162 [Eucalyptus grandis]
17 Hb_003090_150 0.1665328436 - - PREDICTED: phosphatidylinositol:ceramide inositolphosphotransferase 1 [Jatropha curcas]
18 Hb_002151_010 0.1675702597 - - hypothetical protein POPTR_0006s14610g [Populus trichocarpa]
19 Hb_001894_160 0.1675810898 - - conserved hypothetical protein [Ricinus communis]
20 Hb_002900_150 0.1688300506 - - PREDICTED: syntaxin-81 [Jatropha curcas]

Gene co-expression network

sample Hb_001414_050 Hb_001414_050 Hb_001776_200 Hb_001776_200 Hb_001414_050--Hb_001776_200 Hb_006935_040 Hb_006935_040 Hb_001414_050--Hb_006935_040 Hb_000008_390 Hb_000008_390 Hb_001414_050--Hb_000008_390 Hb_011671_280 Hb_011671_280 Hb_001414_050--Hb_011671_280 Hb_031821_010 Hb_031821_010 Hb_001414_050--Hb_031821_010 Hb_002965_080 Hb_002965_080 Hb_001414_050--Hb_002965_080 Hb_011671_110 Hb_011671_110 Hb_001776_200--Hb_011671_110 Hb_047442_010 Hb_047442_010 Hb_001776_200--Hb_047442_010 Hb_005394_010 Hb_005394_010 Hb_001776_200--Hb_005394_010 Hb_002609_190 Hb_002609_190 Hb_001776_200--Hb_002609_190 Hb_001894_160 Hb_001894_160 Hb_001776_200--Hb_001894_160 Hb_000928_250 Hb_000928_250 Hb_006935_040--Hb_000928_250 Hb_006935_040--Hb_001894_160 Hb_006935_040--Hb_000008_390 Hb_015026_020 Hb_015026_020 Hb_006935_040--Hb_015026_020 Hb_003106_200 Hb_003106_200 Hb_006935_040--Hb_003106_200 Hb_000086_180 Hb_000086_180 Hb_000008_390--Hb_000086_180 Hb_011609_010 Hb_011609_010 Hb_000008_390--Hb_011609_010 Hb_000803_090 Hb_000803_090 Hb_000008_390--Hb_000803_090 Hb_000959_190 Hb_000959_190 Hb_000008_390--Hb_000959_190 Hb_001021_100 Hb_001021_100 Hb_000008_390--Hb_001021_100 Hb_000077_210 Hb_000077_210 Hb_011671_280--Hb_000077_210 Hb_000015_150 Hb_000015_150 Hb_011671_280--Hb_000015_150 Hb_000654_050 Hb_000654_050 Hb_011671_280--Hb_000654_050 Hb_001999_320 Hb_001999_320 Hb_011671_280--Hb_001999_320 Hb_000196_010 Hb_000196_010 Hb_011671_280--Hb_000196_010 Hb_031821_010--Hb_002965_080 Hb_041895_040 Hb_041895_040 Hb_031821_010--Hb_041895_040 Hb_001758_130 Hb_001758_130 Hb_031821_010--Hb_001758_130 Hb_001396_070 Hb_001396_070 Hb_031821_010--Hb_001396_070 Hb_000671_060 Hb_000671_060 Hb_031821_010--Hb_000671_060 Hb_001519_060 Hb_001519_060 Hb_002965_080--Hb_001519_060 Hb_002249_170 Hb_002249_170 Hb_002965_080--Hb_002249_170 Hb_002965_080--Hb_011671_110 Hb_001396_120 Hb_001396_120 Hb_002965_080--Hb_001396_120 Hb_007224_010 Hb_007224_010 Hb_002965_080--Hb_007224_010 Hb_000336_180 Hb_000336_180 Hb_002965_080--Hb_000336_180
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.615184 2.14032 4.41568 2.3327 1.05121 0.446575
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.27464 0.252023 0 0.476894 1.33321

CAGE analysis