Hb_000009_220

Information

Type -
Description -
Location Contig9: 214012-216442
Sequence    

Annotation

kegg
ID rcu:RCOM_0411470
description hypothetical protein
nr
ID XP_012079093.1
description PREDICTED: calcium uniporter protein 2, mitochondrial-like [Jatropha curcas]
swissprot
ID O64823
description Calcium uniporter protein 2, mitochondrial OS=Arabidopsis thaliana GN=At2g23790 PE=2 SV=1
trembl
ID A0A067K6G5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12272 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_61854: 214217-215132 , PASA_asmbl_61855: 215134-216410
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000009_220 0.0 - - PREDICTED: calcium uniporter protein 2, mitochondrial-like [Jatropha curcas]
2 Hb_014231_020 0.0933491199 - - PREDICTED: ras-related protein Rab11D [Jatropha curcas]
3 Hb_000979_060 0.0981574424 - - PREDICTED: protein PLANT CADMIUM RESISTANCE 2-like [Gossypium raimondii]
4 Hb_011915_040 0.1019027272 - - hypothetical protein POPTR_0009s15120g [Populus trichocarpa]
5 Hb_000684_100 0.1063702747 - - PREDICTED: cell number regulator 8 [Jatropha curcas]
6 Hb_156635_020 0.111660489 - - PREDICTED: L-lactate dehydrogenase B [Jatropha curcas]
7 Hb_000086_430 0.1187341377 - - hypothetical protein JCGZ_17649 [Jatropha curcas]
8 Hb_001322_020 0.1212251215 - - PREDICTED: polycomb group protein VERNALIZATION 2-like isoform X2 [Populus euphratica]
9 Hb_001307_190 0.1220373156 transcription factor TF Family: G2-like transcription factor, putative [Ricinus communis]
10 Hb_002600_130 0.124525722 - - PREDICTED: uncharacterized protein LOC105646808 [Jatropha curcas]
11 Hb_000048_080 0.1247033527 - - PREDICTED: cyclin-dependent kinase D-3 isoform X1 [Jatropha curcas]
12 Hb_004725_030 0.1256515192 - - PREDICTED: protein ENHANCED DISEASE RESISTANCE 2 isoform X4 [Jatropha curcas]
13 Hb_002311_480 0.1261366255 - - PREDICTED: condensin-2 complex subunit H2 isoform X2 [Jatropha curcas]
14 Hb_004635_030 0.1301473299 - - PREDICTED: F-box/kelch-repeat protein At1g57790-like [Jatropha curcas]
15 Hb_004712_190 0.1307491589 - - PREDICTED: uncharacterized protein LOC105633105 [Jatropha curcas]
16 Hb_008725_060 0.1313105445 - - Protein COBRA precursor, putative [Ricinus communis]
17 Hb_006538_130 0.1324919129 - - Uncharacterized protein TCM_009867 [Theobroma cacao]
18 Hb_001863_160 0.1328783171 - - PREDICTED: 14-3-3-like protein [Jatropha curcas]
19 Hb_005194_020 0.1345673097 - - PREDICTED: UPF0553 protein-like isoform X1 [Jatropha curcas]
20 Hb_011671_310 0.1359458858 - - PREDICTED: polycomb group protein EMBRYONIC FLOWER 2 [Jatropha curcas]

Gene co-expression network

sample Hb_000009_220 Hb_000009_220 Hb_014231_020 Hb_014231_020 Hb_000009_220--Hb_014231_020 Hb_000979_060 Hb_000979_060 Hb_000009_220--Hb_000979_060 Hb_011915_040 Hb_011915_040 Hb_000009_220--Hb_011915_040 Hb_000684_100 Hb_000684_100 Hb_000009_220--Hb_000684_100 Hb_156635_020 Hb_156635_020 Hb_000009_220--Hb_156635_020 Hb_000086_430 Hb_000086_430 Hb_000009_220--Hb_000086_430 Hb_004712_190 Hb_004712_190 Hb_014231_020--Hb_004712_190 Hb_001863_160 Hb_001863_160 Hb_014231_020--Hb_001863_160 Hb_000703_160 Hb_000703_160 Hb_014231_020--Hb_000703_160 Hb_005144_210 Hb_005144_210 Hb_014231_020--Hb_005144_210 Hb_001307_190 Hb_001307_190 Hb_014231_020--Hb_001307_190 Hb_000979_060--Hb_000684_100 Hb_005194_020 Hb_005194_020 Hb_000979_060--Hb_005194_020 Hb_002311_480 Hb_002311_480 Hb_000979_060--Hb_002311_480 Hb_001322_020 Hb_001322_020 Hb_000979_060--Hb_001322_020 Hb_000579_190 Hb_000579_190 Hb_000979_060--Hb_000579_190 Hb_011915_040--Hb_156635_020 Hb_000048_080 Hb_000048_080 Hb_011915_040--Hb_000048_080 Hb_011915_040--Hb_000086_430 Hb_004943_030 Hb_004943_030 Hb_011915_040--Hb_004943_030 Hb_003605_050 Hb_003605_050 Hb_011915_040--Hb_003605_050 Hb_004125_060 Hb_004125_060 Hb_000684_100--Hb_004125_060 Hb_001369_030 Hb_001369_030 Hb_000684_100--Hb_001369_030 Hb_000684_100--Hb_000086_430 Hb_000062_360 Hb_000062_360 Hb_000684_100--Hb_000062_360 Hb_005000_140 Hb_005000_140 Hb_156635_020--Hb_005000_140 Hb_152910_010 Hb_152910_010 Hb_156635_020--Hb_152910_010 Hb_009449_060 Hb_009449_060 Hb_156635_020--Hb_009449_060 Hb_003018_030 Hb_003018_030 Hb_156635_020--Hb_003018_030 Hb_000958_080 Hb_000958_080 Hb_156635_020--Hb_000958_080 Hb_000086_430--Hb_000048_080 Hb_000086_430--Hb_001369_030 Hb_001500_120 Hb_001500_120 Hb_000086_430--Hb_001500_120 Hb_001009_120 Hb_001009_120 Hb_000086_430--Hb_001009_120 Hb_001558_060 Hb_001558_060 Hb_000086_430--Hb_001558_060 Hb_004225_060 Hb_004225_060 Hb_000086_430--Hb_004225_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
24.8709 39.2826 75.728 31.119 14.5308 11.0114
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
13.94 11.985 15.7146 10.6285 11.2273

CAGE analysis