Hb_000696_020

Information

Type -
Description -
Location Contig696: 7425-9879
Sequence    

Annotation

kegg
ID rcu:RCOM_0782590
description serine-threonine protein kinase, plant-type, putative
nr
ID KDP23956.1
description hypothetical protein JCGZ_25344 [Jatropha curcas]
swissprot
ID Q9LK35
description Receptor-like protein kinase THESEUS 1 OS=Arabidopsis thaliana GN=THE1 PE=1 SV=1
trembl
ID A0A067JJ06
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25344 PE=3 SV=1
Gene Ontology
ID GO:0004672
description receptor-like protein kinase theseus 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_54566: 9096-9452
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000696_020 0.0 - - hypothetical protein JCGZ_25344 [Jatropha curcas]
2 Hb_000516_070 0.2236682482 - - -
3 Hb_025669_030 0.2951495807 - - PREDICTED: uncharacterized protein LOC105649301 [Jatropha curcas]
4 Hb_001623_310 0.3163428404 - - hypothetical protein CISIN_1g042596mg [Citrus sinensis]
5 Hb_006535_010 0.3173025885 - - -
6 Hb_002447_160 0.3382108598 - - -
7 Hb_033594_010 0.3432933064 - - -
8 Hb_000861_010 0.3465531206 - - -
9 Hb_004522_020 0.3480815656 - - PREDICTED: uncharacterized protein LOC105646836 [Jatropha curcas]
10 Hb_007140_010 0.3490958949 - - -
11 Hb_172179_010 0.3492071355 - - PREDICTED: Werner Syndrome-like exonuclease [Jatropha curcas]
12 Hb_002631_220 0.3532079147 - - Patellin-4, putative [Ricinus communis]
13 Hb_171062_010 0.3582914975 - - hypothetical protein VITISV_036059 [Vitis vinifera]
14 Hb_021650_050 0.3728131012 - - hypothetical protein RCOM_0852210 [Ricinus communis]
15 Hb_000329_480 0.3769342871 transcription factor TF Family: C2C2-GATA PREDICTED: GATA transcription factor 4 [Jatropha curcas]
16 Hb_005779_070 0.377968511 - - -
17 Hb_005952_020 0.3794588819 - - -
18 Hb_143629_070 0.3804269826 - - PREDICTED: uncharacterized protein LOC105647357 [Jatropha curcas]
19 Hb_010589_100 0.3849969567 - - Thioredoxin domain-containing protein 9-like protein [Morus notabilis]
20 Hb_005725_200 0.3873410404 transcription factor TF Family: GRF hypothetical protein JCGZ_15989 [Jatropha curcas]

Gene co-expression network

sample Hb_000696_020 Hb_000696_020 Hb_000516_070 Hb_000516_070 Hb_000696_020--Hb_000516_070 Hb_025669_030 Hb_025669_030 Hb_000696_020--Hb_025669_030 Hb_001623_310 Hb_001623_310 Hb_000696_020--Hb_001623_310 Hb_006535_010 Hb_006535_010 Hb_000696_020--Hb_006535_010 Hb_002447_160 Hb_002447_160 Hb_000696_020--Hb_002447_160 Hb_033594_010 Hb_033594_010 Hb_000696_020--Hb_033594_010 Hb_004522_020 Hb_004522_020 Hb_000516_070--Hb_004522_020 Hb_002631_220 Hb_002631_220 Hb_000516_070--Hb_002631_220 Hb_167364_020 Hb_167364_020 Hb_000516_070--Hb_167364_020 Hb_000861_010 Hb_000861_010 Hb_000516_070--Hb_000861_010 Hb_000832_330 Hb_000832_330 Hb_000516_070--Hb_000832_330 Hb_025669_030--Hb_001623_310 Hb_000392_460 Hb_000392_460 Hb_025669_030--Hb_000392_460 Hb_083822_010 Hb_083822_010 Hb_025669_030--Hb_083822_010 Hb_021346_040 Hb_021346_040 Hb_025669_030--Hb_021346_040 Hb_171062_010 Hb_171062_010 Hb_025669_030--Hb_171062_010 Hb_001623_310--Hb_000392_460 Hb_001623_310--Hb_083822_010 Hb_001623_310--Hb_021346_040 Hb_001623_310--Hb_171062_010 Hb_059481_010 Hb_059481_010 Hb_001623_310--Hb_059481_010 Hb_000445_240 Hb_000445_240 Hb_006535_010--Hb_000445_240 Hb_172179_010 Hb_172179_010 Hb_006535_010--Hb_172179_010 Hb_007140_010 Hb_007140_010 Hb_006535_010--Hb_007140_010 Hb_006535_010--Hb_033594_010 Hb_114146_010 Hb_114146_010 Hb_006535_010--Hb_114146_010 Hb_002791_040 Hb_002791_040 Hb_006535_010--Hb_002791_040 Hb_003768_060 Hb_003768_060 Hb_002447_160--Hb_003768_060 Hb_001004_050 Hb_001004_050 Hb_002447_160--Hb_001004_050 Hb_002447_160--Hb_002631_220 Hb_002447_160--Hb_059481_010 Hb_000787_010 Hb_000787_010 Hb_002447_160--Hb_000787_010 Hb_004021_090 Hb_004021_090 Hb_002447_160--Hb_004021_090 Hb_001994_010 Hb_001994_010 Hb_033594_010--Hb_001994_010 Hb_005389_130 Hb_005389_130 Hb_033594_010--Hb_005389_130 Hb_074683_010 Hb_074683_010 Hb_033594_010--Hb_074683_010 Hb_002027_370 Hb_002027_370 Hb_033594_010--Hb_002027_370 Hb_017214_050 Hb_017214_050 Hb_033594_010--Hb_017214_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0290757 0.0120435 0.0336725 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0260686 0 0.0104131 0

CAGE analysis