Hb_114146_010

Information

Type -
Description -
Location Contig114146: 3-396
Sequence    

Annotation

kegg
ID rcu:RCOM_0836430
description amino acid transporter, putative
nr
ID KDP41201.1
description hypothetical protein JCGZ_15608 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KYE2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15608 PE=4 SV=1
Gene Ontology
ID GO:0016021
description vacuolar amino acid transporter 1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_114146_010 0.0 - - hypothetical protein JCGZ_15608 [Jatropha curcas]
2 Hb_000445_240 0.2019501742 - - conserved hypothetical protein [Ricinus communis]
3 Hb_172179_010 0.2246904843 - - PREDICTED: Werner Syndrome-like exonuclease [Jatropha curcas]
4 Hb_007140_010 0.2248608124 - - -
5 Hb_005305_190 0.247387802 transcription factor TF Family: NAC -
6 Hb_000752_030 0.2594274956 transcription factor TF Family: bHLH hypothetical protein RCOM_0978110 [Ricinus communis]
7 Hb_010534_030 0.259525778 - - calcineurin-like phosphoesterase [Manihot esculenta]
8 Hb_001950_130 0.259825673 - - -
9 Hb_004970_080 0.2604069387 - - PREDICTED: protein RALF-like 34 [Jatropha curcas]
10 Hb_000264_330 0.262754733 - - PREDICTED: uncharacterized protein LOC105766768 [Gossypium raimondii]
11 Hb_000139_210 0.2634984491 - - -
12 Hb_005946_180 0.2660806386 - - PREDICTED: uncharacterized protein LOC100818788 [Glycine max]
13 Hb_006535_010 0.2739865745 - - -
14 Hb_008221_120 0.2863856842 - - PREDICTED: GDSL esterase/lipase At5g63170-like [Jatropha curcas]
15 Hb_005779_070 0.3071427779 - - -
16 Hb_005952_020 0.3105049452 - - -
17 Hb_001410_050 0.3275636972 - - putative polyprotein [Oryza sativa Japonica Group]
18 Hb_006355_120 0.3306457828 - - conserved hypothetical protein [Ricinus communis]
19 Hb_010589_100 0.3345541832 - - Thioredoxin domain-containing protein 9-like protein [Morus notabilis]
20 Hb_002890_070 0.3406087308 - - ATP-dependent RNA helicase family protein [Populus trichocarpa]

Gene co-expression network

sample Hb_114146_010 Hb_114146_010 Hb_000445_240 Hb_000445_240 Hb_114146_010--Hb_000445_240 Hb_172179_010 Hb_172179_010 Hb_114146_010--Hb_172179_010 Hb_007140_010 Hb_007140_010 Hb_114146_010--Hb_007140_010 Hb_005305_190 Hb_005305_190 Hb_114146_010--Hb_005305_190 Hb_000752_030 Hb_000752_030 Hb_114146_010--Hb_000752_030 Hb_010534_030 Hb_010534_030 Hb_114146_010--Hb_010534_030 Hb_000445_240--Hb_005305_190 Hb_006535_010 Hb_006535_010 Hb_000445_240--Hb_006535_010 Hb_008221_120 Hb_008221_120 Hb_000445_240--Hb_008221_120 Hb_005779_070 Hb_005779_070 Hb_000445_240--Hb_005779_070 Hb_005952_020 Hb_005952_020 Hb_000445_240--Hb_005952_020 Hb_172179_010--Hb_007140_010 Hb_172179_010--Hb_005779_070 Hb_172179_010--Hb_005952_020 Hb_010589_100 Hb_010589_100 Hb_172179_010--Hb_010589_100 Hb_172179_010--Hb_005305_190 Hb_007140_010--Hb_005779_070 Hb_007140_010--Hb_005952_020 Hb_007140_010--Hb_010589_100 Hb_007140_010--Hb_005305_190 Hb_005305_190--Hb_008221_120 Hb_005305_190--Hb_005779_070 Hb_005305_190--Hb_005952_020 Hb_005305_190--Hb_010589_100 Hb_000752_030--Hb_010534_030 Hb_001950_130 Hb_001950_130 Hb_000752_030--Hb_001950_130 Hb_004970_080 Hb_004970_080 Hb_000752_030--Hb_004970_080 Hb_000264_330 Hb_000264_330 Hb_000752_030--Hb_000264_330 Hb_000139_210 Hb_000139_210 Hb_000752_030--Hb_000139_210 Hb_005946_180 Hb_005946_180 Hb_000752_030--Hb_005946_180 Hb_010534_030--Hb_001950_130 Hb_010534_030--Hb_004970_080 Hb_010534_030--Hb_000264_330 Hb_010534_030--Hb_000139_210 Hb_010534_030--Hb_005946_180
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.136136 0 0.223282 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.766208 0 0 0

CAGE analysis