Hb_007140_010

Information

Type -
Description -
Location Contig7140: 32639-40748
Sequence    

Annotation

kegg
ID sbi:SORBI_02g025125
description SORBIDRAFT_02g025125, Sb02g025125; hypothetical protein
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007140_010 0.0 - - -
2 Hb_172179_010 0.0006044562 - - PREDICTED: Werner Syndrome-like exonuclease [Jatropha curcas]
3 Hb_005779_070 0.2066996689 - - -
4 Hb_005952_020 0.2110353662 - - -
5 Hb_114146_010 0.2248608124 - - hypothetical protein JCGZ_15608 [Jatropha curcas]
6 Hb_010589_100 0.2329961112 - - Thioredoxin domain-containing protein 9-like protein [Morus notabilis]
7 Hb_005305_190 0.2427285453 transcription factor TF Family: NAC -
8 Hb_006535_010 0.2582441762 - - -
9 Hb_008221_120 0.2671481695 - - PREDICTED: GDSL esterase/lipase At5g63170-like [Jatropha curcas]
10 Hb_000445_240 0.3137920118 - - conserved hypothetical protein [Ricinus communis]
11 Hb_025669_030 0.315746952 - - PREDICTED: uncharacterized protein LOC105649301 [Jatropha curcas]
12 Hb_001623_310 0.3471280879 - - hypothetical protein CISIN_1g042596mg [Citrus sinensis]
13 Hb_000696_020 0.3490958949 - - hypothetical protein JCGZ_25344 [Jatropha curcas]
14 Hb_001410_050 0.3564153558 - - putative polyprotein [Oryza sativa Japonica Group]
15 Hb_006355_120 0.3565821147 - - conserved hypothetical protein [Ricinus communis]
16 Hb_002259_180 0.3577020505 - - -
17 Hb_167364_020 0.3623803668 - - -
18 Hb_002435_020 0.367667035 - - hypothetical protein POPTR_0011s01952g [Populus trichocarpa]
19 Hb_003197_070 0.3692573462 - - PREDICTED: uncharacterized protein LOC104884990 [Beta vulgaris subsp. vulgaris]
20 Hb_005946_180 0.3728094155 - - PREDICTED: uncharacterized protein LOC100818788 [Glycine max]

Gene co-expression network

sample Hb_007140_010 Hb_007140_010 Hb_172179_010 Hb_172179_010 Hb_007140_010--Hb_172179_010 Hb_005779_070 Hb_005779_070 Hb_007140_010--Hb_005779_070 Hb_005952_020 Hb_005952_020 Hb_007140_010--Hb_005952_020 Hb_114146_010 Hb_114146_010 Hb_007140_010--Hb_114146_010 Hb_010589_100 Hb_010589_100 Hb_007140_010--Hb_010589_100 Hb_005305_190 Hb_005305_190 Hb_007140_010--Hb_005305_190 Hb_172179_010--Hb_005779_070 Hb_172179_010--Hb_005952_020 Hb_172179_010--Hb_114146_010 Hb_172179_010--Hb_010589_100 Hb_172179_010--Hb_005305_190 Hb_005779_070--Hb_005952_020 Hb_005779_070--Hb_010589_100 Hb_008221_120 Hb_008221_120 Hb_005779_070--Hb_008221_120 Hb_005779_070--Hb_005305_190 Hb_005952_020--Hb_010589_100 Hb_005952_020--Hb_008221_120 Hb_005952_020--Hb_005305_190 Hb_000445_240 Hb_000445_240 Hb_114146_010--Hb_000445_240 Hb_114146_010--Hb_005305_190 Hb_000752_030 Hb_000752_030 Hb_114146_010--Hb_000752_030 Hb_010534_030 Hb_010534_030 Hb_114146_010--Hb_010534_030 Hb_010589_100--Hb_008221_120 Hb_010589_100--Hb_005305_190 Hb_005305_190--Hb_008221_120 Hb_005305_190--Hb_000445_240
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0283163 0 0.0426138 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0511981 0 0 0

CAGE analysis