Hb_000445_240

Information

Type -
Description -
Location Contig445: 251026-251298
Sequence    

Annotation

kegg
ID rcu:RCOM_0561200
description hypothetical protein
nr
ID XP_002520286.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9S2R7
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0561200 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000445_240 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_114146_010 0.2019501742 - - hypothetical protein JCGZ_15608 [Jatropha curcas]
3 Hb_005305_190 0.2340793955 transcription factor TF Family: NAC -
4 Hb_006535_010 0.2433372757 - - -
5 Hb_008221_120 0.2609884057 - - PREDICTED: GDSL esterase/lipase At5g63170-like [Jatropha curcas]
6 Hb_005779_070 0.3088840503 - - -
7 Hb_005952_020 0.3106391653 - - -
8 Hb_008689_020 0.3129982646 - - conserved hypothetical protein [Ricinus communis]
9 Hb_007140_010 0.3137920118 - - -
10 Hb_172179_010 0.3138657692 - - PREDICTED: Werner Syndrome-like exonuclease [Jatropha curcas]
11 Hb_120112_010 0.3142707016 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
12 Hb_000976_370 0.3158694072 - - beta-glucosidase, putative [Ricinus communis]
13 Hb_017214_050 0.3209758225 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
14 Hb_002027_370 0.3215522685 - - conserved hypothetical protein [Ricinus communis]
15 Hb_033594_010 0.3238053144 - - -
16 Hb_010589_100 0.3279693418 - - Thioredoxin domain-containing protein 9-like protein [Morus notabilis]
17 Hb_074683_010 0.3336447883 - - -
18 Hb_002890_070 0.3517636792 - - ATP-dependent RNA helicase family protein [Populus trichocarpa]
19 Hb_005772_010 0.3525796956 - - PREDICTED: abscisic acid receptor PYL4 [Jatropha curcas]
20 Hb_024650_040 0.3650958173 - - PREDICTED: josephin-like protein [Jatropha curcas]

Gene co-expression network

sample Hb_000445_240 Hb_000445_240 Hb_114146_010 Hb_114146_010 Hb_000445_240--Hb_114146_010 Hb_005305_190 Hb_005305_190 Hb_000445_240--Hb_005305_190 Hb_006535_010 Hb_006535_010 Hb_000445_240--Hb_006535_010 Hb_008221_120 Hb_008221_120 Hb_000445_240--Hb_008221_120 Hb_005779_070 Hb_005779_070 Hb_000445_240--Hb_005779_070 Hb_005952_020 Hb_005952_020 Hb_000445_240--Hb_005952_020 Hb_172179_010 Hb_172179_010 Hb_114146_010--Hb_172179_010 Hb_007140_010 Hb_007140_010 Hb_114146_010--Hb_007140_010 Hb_114146_010--Hb_005305_190 Hb_000752_030 Hb_000752_030 Hb_114146_010--Hb_000752_030 Hb_010534_030 Hb_010534_030 Hb_114146_010--Hb_010534_030 Hb_005305_190--Hb_008221_120 Hb_005305_190--Hb_005779_070 Hb_005305_190--Hb_005952_020 Hb_010589_100 Hb_010589_100 Hb_005305_190--Hb_010589_100 Hb_005305_190--Hb_007140_010 Hb_006535_010--Hb_172179_010 Hb_006535_010--Hb_007140_010 Hb_033594_010 Hb_033594_010 Hb_006535_010--Hb_033594_010 Hb_006535_010--Hb_114146_010 Hb_002791_040 Hb_002791_040 Hb_006535_010--Hb_002791_040 Hb_008221_120--Hb_005952_020 Hb_008221_120--Hb_005779_070 Hb_008221_120--Hb_010589_100 Hb_000976_370 Hb_000976_370 Hb_008221_120--Hb_000976_370 Hb_120112_010 Hb_120112_010 Hb_008221_120--Hb_120112_010 Hb_005779_070--Hb_005952_020 Hb_005779_070--Hb_010589_100 Hb_005779_070--Hb_007140_010 Hb_005779_070--Hb_172179_010 Hb_005952_020--Hb_010589_100 Hb_005952_020--Hb_007140_010 Hb_005952_020--Hb_172179_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.618411 0 0.359013 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 2.28142 0 0.177541 0

CAGE analysis