Hb_033594_010

Information

Type -
Description -
Location Contig33594: 918-2564
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_033594_010 0.0 - - -
2 Hb_006535_010 0.26570459 - - -
3 Hb_001994_010 0.2764074138 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
4 Hb_005389_130 0.2866248455 - - hypothetical protein CICLE_v10009852mg [Citrus clementina]
5 Hb_074683_010 0.2904164006 - - -
6 Hb_002027_370 0.2981881465 - - conserved hypothetical protein [Ricinus communis]
7 Hb_017214_050 0.2987669129 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
8 Hb_015836_010 0.323319549 - - -
9 Hb_000445_240 0.3238053144 - - conserved hypothetical protein [Ricinus communis]
10 Hb_001591_010 0.3402991019 transcription factor TF Family: MYB myb domain protein [Hevea brasiliensis]
11 Hb_000696_020 0.3432933064 - - hypothetical protein JCGZ_25344 [Jatropha curcas]
12 Hb_024898_020 0.3610127085 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
13 Hb_012654_030 0.397713075 - - conserved hypothetical protein [Ricinus communis]
14 Hb_003038_170 0.400817566 - - conserved hypothetical protein [Ricinus communis]
15 Hb_000222_030 0.4018189506 - - -
16 Hb_005779_070 0.4029309777 - - -
17 Hb_005952_020 0.4036492075 - - -
18 Hb_005305_190 0.4046135636 transcription factor TF Family: NAC -
19 Hb_001066_010 0.4062104765 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
20 Hb_010589_100 0.4092063081 - - Thioredoxin domain-containing protein 9-like protein [Morus notabilis]

Gene co-expression network

sample Hb_033594_010 Hb_033594_010 Hb_006535_010 Hb_006535_010 Hb_033594_010--Hb_006535_010 Hb_001994_010 Hb_001994_010 Hb_033594_010--Hb_001994_010 Hb_005389_130 Hb_005389_130 Hb_033594_010--Hb_005389_130 Hb_074683_010 Hb_074683_010 Hb_033594_010--Hb_074683_010 Hb_002027_370 Hb_002027_370 Hb_033594_010--Hb_002027_370 Hb_017214_050 Hb_017214_050 Hb_033594_010--Hb_017214_050 Hb_000445_240 Hb_000445_240 Hb_006535_010--Hb_000445_240 Hb_172179_010 Hb_172179_010 Hb_006535_010--Hb_172179_010 Hb_007140_010 Hb_007140_010 Hb_006535_010--Hb_007140_010 Hb_114146_010 Hb_114146_010 Hb_006535_010--Hb_114146_010 Hb_002791_040 Hb_002791_040 Hb_006535_010--Hb_002791_040 Hb_001994_010--Hb_074683_010 Hb_001994_010--Hb_005389_130 Hb_001994_010--Hb_002027_370 Hb_001994_010--Hb_017214_050 Hb_015836_010 Hb_015836_010 Hb_001994_010--Hb_015836_010 Hb_005389_130--Hb_074683_010 Hb_005389_130--Hb_002027_370 Hb_005389_130--Hb_017214_050 Hb_005389_130--Hb_015836_010 Hb_012654_030 Hb_012654_030 Hb_005389_130--Hb_012654_030 Hb_074683_010--Hb_002027_370 Hb_074683_010--Hb_017214_050 Hb_074683_010--Hb_015836_010 Hb_002027_370--Hb_017214_050 Hb_002027_370--Hb_015836_010 Hb_001066_010 Hb_001066_010 Hb_002027_370--Hb_001066_010 Hb_017214_050--Hb_015836_010 Hb_017214_050--Hb_001066_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0495157 0 0.0296999 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0712414 0 0.0581935 0

CAGE analysis