Hb_015836_010

Information

Type -
Description -
Location Contig15836: 3839-8221
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_015836_010 0.0 - - -
2 Hb_017214_050 0.1326349479 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
3 Hb_002027_370 0.1342729408 - - conserved hypothetical protein [Ricinus communis]
4 Hb_074683_010 0.1504567777 - - -
5 Hb_005389_130 0.1975429655 - - hypothetical protein CICLE_v10009852mg [Citrus clementina]
6 Hb_001994_010 0.2060774509 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
7 Hb_106496_010 0.3011741285 - - PREDICTED: uncharacterized protein LOC105796032 [Gossypium raimondii]
8 Hb_001066_010 0.302249188 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
9 Hb_033594_010 0.323319549 - - -
10 Hb_000976_370 0.3259286036 - - beta-glucosidase, putative [Ricinus communis]
11 Hb_120112_010 0.3275682963 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
12 Hb_008689_020 0.3289325331 - - conserved hypothetical protein [Ricinus communis]
13 Hb_010232_010 0.330432303 - - -
14 Hb_001934_020 0.3329857018 - - PREDICTED: uncharacterized protein LOC105178413 [Sesamum indicum]
15 Hb_010803_010 0.3564494108 - - hypothetical protein PRUPE_ppa022673mg [Prunus persica]
16 Hb_008221_120 0.3707535104 - - PREDICTED: GDSL esterase/lipase At5g63170-like [Jatropha curcas]
17 Hb_000445_240 0.3717435032 - - conserved hypothetical protein [Ricinus communis]
18 Hb_012654_030 0.3753777675 - - conserved hypothetical protein [Ricinus communis]
19 Hb_005305_190 0.3857546686 transcription factor TF Family: NAC -
20 Hb_004584_010 0.4034566781 - - PREDICTED: uncharacterized protein LOC104094989 [Nicotiana tomentosiformis]

Gene co-expression network

sample Hb_015836_010 Hb_015836_010 Hb_017214_050 Hb_017214_050 Hb_015836_010--Hb_017214_050 Hb_002027_370 Hb_002027_370 Hb_015836_010--Hb_002027_370 Hb_074683_010 Hb_074683_010 Hb_015836_010--Hb_074683_010 Hb_005389_130 Hb_005389_130 Hb_015836_010--Hb_005389_130 Hb_001994_010 Hb_001994_010 Hb_015836_010--Hb_001994_010 Hb_106496_010 Hb_106496_010 Hb_015836_010--Hb_106496_010 Hb_017214_050--Hb_002027_370 Hb_017214_050--Hb_074683_010 Hb_017214_050--Hb_001994_010 Hb_017214_050--Hb_005389_130 Hb_001066_010 Hb_001066_010 Hb_017214_050--Hb_001066_010 Hb_002027_370--Hb_074683_010 Hb_002027_370--Hb_001994_010 Hb_002027_370--Hb_005389_130 Hb_002027_370--Hb_001066_010 Hb_074683_010--Hb_001994_010 Hb_074683_010--Hb_005389_130 Hb_033594_010 Hb_033594_010 Hb_074683_010--Hb_033594_010 Hb_005389_130--Hb_001994_010 Hb_012654_030 Hb_012654_030 Hb_005389_130--Hb_012654_030 Hb_001994_010--Hb_033594_010 Hb_001934_020 Hb_001934_020 Hb_106496_010--Hb_001934_020 Hb_000976_370 Hb_000976_370 Hb_106496_010--Hb_000976_370 Hb_120112_010 Hb_120112_010 Hb_106496_010--Hb_120112_010 Hb_008689_020 Hb_008689_020 Hb_106496_010--Hb_008689_020 Hb_008221_120 Hb_008221_120 Hb_106496_010--Hb_008221_120 Hb_005305_190 Hb_005305_190 Hb_106496_010--Hb_005305_190
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.111463 0 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.102415 0 0.0425061 0

CAGE analysis