Hb_001934_020

Information

Type -
Description -
Location Contig1934: 13789-20975
Sequence    

Annotation

kegg
ID mtr:MTR_5g036060
description PttB
nr
ID XP_011100178.1
description PREDICTED: uncharacterized protein LOC105178413 [Sesamum indicum]
swissprot
ID -
description -
trembl
ID A0A067L1T8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00233 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001934_020 0.0 - - PREDICTED: uncharacterized protein LOC105178413 [Sesamum indicum]
2 Hb_106496_010 0.1063062657 - - PREDICTED: uncharacterized protein LOC105796032 [Gossypium raimondii]
3 Hb_000976_370 0.2953220214 - - beta-glucosidase, putative [Ricinus communis]
4 Hb_120112_010 0.2993509257 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
5 Hb_008689_020 0.3026302505 - - conserved hypothetical protein [Ricinus communis]
6 Hb_008221_120 0.3099097134 - - PREDICTED: GDSL esterase/lipase At5g63170-like [Jatropha curcas]
7 Hb_010589_100 0.3196331364 - - Thioredoxin domain-containing protein 9-like protein [Morus notabilis]
8 Hb_001055_040 0.321379709 - - PREDICTED: terpene synthase 10-like [Jatropha curcas]
9 Hb_000463_060 0.3289388417 - - PREDICTED: uncharacterized protein LOC105638432 [Jatropha curcas]
10 Hb_015836_010 0.3329857018 - - -
11 Hb_005952_020 0.3378181284 - - -
12 Hb_005779_070 0.3416197555 - - -
13 Hb_005305_190 0.3454484482 transcription factor TF Family: NAC -
14 Hb_003687_180 0.3571296207 - - hypothetical protein JCGZ_02335 [Jatropha curcas]
15 Hb_032533_010 0.3659728799 - - PREDICTED: uncharacterized protein LOC105650298, partial [Jatropha curcas]
16 Hb_004584_010 0.3984229083 - - PREDICTED: uncharacterized protein LOC104094989 [Nicotiana tomentosiformis]
17 Hb_000011_030 0.4104604664 - - hypothetical protein POPTR_0003s18920g [Populus trichocarpa]
18 Hb_000015_110 0.4104604664 - - hypothetical protein MIMGU_mgv1a020753mg, partial [Erythranthe guttata]
19 Hb_000029_040 0.4104604664 - - conserved hypothetical protein [Ricinus communis]
20 Hb_000030_110 0.4104604664 - - -

Gene co-expression network

sample Hb_001934_020 Hb_001934_020 Hb_106496_010 Hb_106496_010 Hb_001934_020--Hb_106496_010 Hb_000976_370 Hb_000976_370 Hb_001934_020--Hb_000976_370 Hb_120112_010 Hb_120112_010 Hb_001934_020--Hb_120112_010 Hb_008689_020 Hb_008689_020 Hb_001934_020--Hb_008689_020 Hb_008221_120 Hb_008221_120 Hb_001934_020--Hb_008221_120 Hb_010589_100 Hb_010589_100 Hb_001934_020--Hb_010589_100 Hb_106496_010--Hb_000976_370 Hb_106496_010--Hb_120112_010 Hb_106496_010--Hb_008689_020 Hb_106496_010--Hb_008221_120 Hb_005305_190 Hb_005305_190 Hb_106496_010--Hb_005305_190 Hb_000976_370--Hb_120112_010 Hb_000976_370--Hb_008689_020 Hb_000976_370--Hb_008221_120 Hb_000976_370--Hb_005305_190 Hb_120112_010--Hb_008689_020 Hb_120112_010--Hb_008221_120 Hb_120112_010--Hb_005305_190 Hb_008689_020--Hb_008221_120 Hb_008689_020--Hb_005305_190 Hb_008221_120--Hb_005305_190 Hb_005952_020 Hb_005952_020 Hb_008221_120--Hb_005952_020 Hb_005779_070 Hb_005779_070 Hb_008221_120--Hb_005779_070 Hb_008221_120--Hb_010589_100 Hb_010589_100--Hb_005952_020 Hb_010589_100--Hb_005779_070 Hb_010589_100--Hb_005305_190 Hb_007140_010 Hb_007140_010 Hb_010589_100--Hb_007140_010 Hb_172179_010 Hb_172179_010 Hb_010589_100--Hb_172179_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.156017 0 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0665081 0 0 0

CAGE analysis