Hb_025669_030

Information

Type -
Description -
Location Contig25669: 14265-15870
Sequence    

Annotation

kegg
ID rcu:RCOM_0903640
description hypothetical protein
nr
ID XP_012091303.1
description PREDICTED: uncharacterized protein LOC105649301 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JAC1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21182 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_025669_030 0.0 - - PREDICTED: uncharacterized protein LOC105649301 [Jatropha curcas]
2 Hb_001623_310 0.0544542427 - - hypothetical protein CISIN_1g042596mg [Citrus sinensis]
3 Hb_000392_460 0.2349541354 - - Pectate lyase precursor, putative [Ricinus communis]
4 Hb_083822_010 0.2532875168 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
5 Hb_021346_040 0.2644272198 - - hypothetical protein JCGZ_26751 [Jatropha curcas]
6 Hb_171062_010 0.269748567 - - hypothetical protein VITISV_036059 [Vitis vinifera]
7 Hb_000696_020 0.2951495807 - - hypothetical protein JCGZ_25344 [Jatropha curcas]
8 Hb_004522_020 0.3091346413 - - PREDICTED: uncharacterized protein LOC105646836 [Jatropha curcas]
9 Hb_172179_010 0.3154984976 - - PREDICTED: Werner Syndrome-like exonuclease [Jatropha curcas]
10 Hb_007140_010 0.315746952 - - -
11 Hb_000853_040 0.3270050502 - - conserved hypothetical protein [Ricinus communis]
12 Hb_059481_010 0.3271775696 - - hypothetical protein POPTR_0008s06860g [Populus trichocarpa]
13 Hb_003938_030 0.330145343 transcription factor TF Family: ERF ethylene-responsive transcription factor 2 [Hevea brasiliensis]
14 Hb_000861_010 0.3595354645 - - -
15 Hb_011505_010 0.3596435634 - - -
16 Hb_000069_580 0.3676213979 - - conserved hypothetical protein [Ricinus communis]
17 Hb_002435_020 0.3683172874 - - hypothetical protein POPTR_0011s01952g [Populus trichocarpa]
18 Hb_008221_020 0.3694048809 - - hypothetical protein JCGZ_15014 [Jatropha curcas]
19 Hb_000375_230 0.3709684503 - - Chain A, Anomalous Substructure Of Hydroxynitrile Lyase
20 Hb_000329_480 0.372106087 transcription factor TF Family: C2C2-GATA PREDICTED: GATA transcription factor 4 [Jatropha curcas]

Gene co-expression network

sample Hb_025669_030 Hb_025669_030 Hb_001623_310 Hb_001623_310 Hb_025669_030--Hb_001623_310 Hb_000392_460 Hb_000392_460 Hb_025669_030--Hb_000392_460 Hb_083822_010 Hb_083822_010 Hb_025669_030--Hb_083822_010 Hb_021346_040 Hb_021346_040 Hb_025669_030--Hb_021346_040 Hb_171062_010 Hb_171062_010 Hb_025669_030--Hb_171062_010 Hb_000696_020 Hb_000696_020 Hb_025669_030--Hb_000696_020 Hb_001623_310--Hb_000392_460 Hb_001623_310--Hb_083822_010 Hb_001623_310--Hb_021346_040 Hb_001623_310--Hb_171062_010 Hb_059481_010 Hb_059481_010 Hb_001623_310--Hb_059481_010 Hb_000392_460--Hb_021346_040 Hb_000392_460--Hb_083822_010 Hb_000853_040 Hb_000853_040 Hb_000392_460--Hb_000853_040 Hb_003938_030 Hb_003938_030 Hb_000392_460--Hb_003938_030 Hb_083822_010--Hb_021346_040 Hb_083822_010--Hb_003938_030 Hb_000375_230 Hb_000375_230 Hb_083822_010--Hb_000375_230 Hb_083822_010--Hb_000853_040 Hb_021346_040--Hb_000853_040 Hb_167452_010 Hb_167452_010 Hb_021346_040--Hb_167452_010 Hb_021346_040--Hb_003938_030 Hb_003902_060 Hb_003902_060 Hb_171062_010--Hb_003902_060 Hb_002447_160 Hb_002447_160 Hb_171062_010--Hb_002447_160 Hb_000045_280 Hb_000045_280 Hb_171062_010--Hb_000045_280 Hb_003768_060 Hb_003768_060 Hb_171062_010--Hb_003768_060 Hb_000516_070 Hb_000516_070 Hb_000696_020--Hb_000516_070 Hb_000696_020--Hb_001623_310 Hb_006535_010 Hb_006535_010 Hb_000696_020--Hb_006535_010 Hb_000696_020--Hb_002447_160 Hb_033594_010 Hb_033594_010 Hb_000696_020--Hb_033594_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0601052 0.0804004 0.259579 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.172836 0 0 0

CAGE analysis