Hb_000045_280

Information

Type -
Description -
Location Contig45: 272557-273666
Sequence    

Annotation

kegg
ID mdm:103455173
description uncharacterized LOC103455173
nr
ID KDP38723.1
description hypothetical protein JCGZ_04076 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KUW5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04076 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000045_280 0.0 - - hypothetical protein JCGZ_04076 [Jatropha curcas]
2 Hb_003902_060 0.2347911531 - - PREDICTED: seed biotin-containing protein SBP65 [Jatropha curcas]
3 Hb_089140_010 0.2530973065 - - -
4 Hb_000731_230 0.2558379153 - - PREDICTED: abnormal spindle-like microcephaly-associated protein homolog [Jatropha curcas]
5 Hb_006907_100 0.2621214413 - - PREDICTED: tropinone reductase-like 3 [Jatropha curcas]
6 Hb_001269_290 0.2622436868 - - PREDICTED: uncharacterized protein LOC103438859 [Malus domestica]
7 Hb_158384_010 0.2728464376 - - poly(A) polymerase, putative [Ricinus communis]
8 Hb_186589_010 0.2760752172 - - PREDICTED: developmentally-regulated G-protein 3 [Nelumbo nucifera]
9 Hb_005273_020 0.2775272951 - - -
10 Hb_001842_030 0.2843674693 - - PREDICTED: histone deacetylase 9 [Jatropha curcas]
11 Hb_000926_230 0.2861756082 - - conserved hypothetical protein [Ricinus communis]
12 Hb_000242_020 0.2903095065 - - hypothetical protein CICLE_v100246891mg, partial [Citrus clementina]
13 Hb_100105_010 0.2955740662 - - PREDICTED: ras-related protein RABF1 [Jatropha curcas]
14 Hb_074836_010 0.3011059006 - - conserved hypothetical protein [Ricinus communis]
15 Hb_000139_490 0.3073797313 - - PREDICTED: transcription factor MUTE [Jatropha curcas]
16 Hb_171062_010 0.307639982 - - hypothetical protein VITISV_036059 [Vitis vinifera]
17 Hb_000186_270 0.3094555515 - - hypothetical protein JCGZ_02112 [Jatropha curcas]
18 Hb_009976_010 0.309725066 - - PREDICTED: uncharacterized protein LOC105630216 [Jatropha curcas]
19 Hb_003776_040 0.312555241 - - PREDICTED: RING finger protein 165-like isoform X2 [Populus euphratica]
20 Hb_001196_040 0.3128691726 - - PREDICTED: uncharacterized protein LOC104100193 [Nicotiana tomentosiformis]

Gene co-expression network

sample Hb_000045_280 Hb_000045_280 Hb_003902_060 Hb_003902_060 Hb_000045_280--Hb_003902_060 Hb_089140_010 Hb_089140_010 Hb_000045_280--Hb_089140_010 Hb_000731_230 Hb_000731_230 Hb_000045_280--Hb_000731_230 Hb_006907_100 Hb_006907_100 Hb_000045_280--Hb_006907_100 Hb_001269_290 Hb_001269_290 Hb_000045_280--Hb_001269_290 Hb_158384_010 Hb_158384_010 Hb_000045_280--Hb_158384_010 Hb_078568_010 Hb_078568_010 Hb_003902_060--Hb_078568_010 Hb_100105_010 Hb_100105_010 Hb_003902_060--Hb_100105_010 Hb_003902_060--Hb_000731_230 Hb_075230_010 Hb_075230_010 Hb_003902_060--Hb_075230_010 Hb_000099_090 Hb_000099_090 Hb_003902_060--Hb_000099_090 Hb_089140_010--Hb_006907_100 Hb_001898_150 Hb_001898_150 Hb_089140_010--Hb_001898_150 Hb_000826_060 Hb_000826_060 Hb_089140_010--Hb_000826_060 Hb_001711_010 Hb_001711_010 Hb_089140_010--Hb_001711_010 Hb_003776_040 Hb_003776_040 Hb_089140_010--Hb_003776_040 Hb_010913_010 Hb_010913_010 Hb_089140_010--Hb_010913_010 Hb_000731_230--Hb_078568_010 Hb_000731_230--Hb_075230_010 Hb_001196_040 Hb_001196_040 Hb_000731_230--Hb_001196_040 Hb_149714_010 Hb_149714_010 Hb_000731_230--Hb_149714_010 Hb_000731_230--Hb_100105_010 Hb_000302_130 Hb_000302_130 Hb_006907_100--Hb_000302_130 Hb_000743_030 Hb_000743_030 Hb_006907_100--Hb_000743_030 Hb_005000_250 Hb_005000_250 Hb_006907_100--Hb_005000_250 Hb_000122_050 Hb_000122_050 Hb_006907_100--Hb_000122_050 Hb_155541_010 Hb_155541_010 Hb_006907_100--Hb_155541_010 Hb_005928_050 Hb_005928_050 Hb_006907_100--Hb_005928_050 Hb_001269_290--Hb_006907_100 Hb_164255_010 Hb_164255_010 Hb_001269_290--Hb_164255_010 Hb_001269_290--Hb_005928_050 Hb_001269_290--Hb_155541_010 Hb_012379_010 Hb_012379_010 Hb_001269_290--Hb_012379_010 Hb_074836_010 Hb_074836_010 Hb_001269_290--Hb_074836_010 Hb_001762_050 Hb_001762_050 Hb_158384_010--Hb_001762_050 Hb_005048_110 Hb_005048_110 Hb_158384_010--Hb_005048_110 Hb_003768_060 Hb_003768_060 Hb_158384_010--Hb_003768_060 Hb_001135_110 Hb_001135_110 Hb_158384_010--Hb_001135_110 Hb_006775_070 Hb_006775_070 Hb_158384_010--Hb_006775_070 Hb_158384_010--Hb_003902_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.436019 0.386584 0.747419 0.535253 0 0.0368416
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.191954 0.452609 0 0 0

CAGE analysis