Hb_000826_060

Information

Type -
Description -
Location Contig826: 85981-88083
Sequence    

Annotation

kegg
ID sot:102604542
description uncharacterized LOC102604542
nr
ID XP_012066659.1
description PREDICTED: uncharacterized protein LOC105629655 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L1T8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00233 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000826_060 0.0 - - PREDICTED: uncharacterized protein LOC105629655 [Jatropha curcas]
2 Hb_002232_280 0.2240674189 - - PREDICTED: pleiotropic drug resistance protein 1-like isoform X6 [Jatropha curcas]
3 Hb_089140_010 0.2336502151 - - -
4 Hb_000627_100 0.2419335566 - - -
5 Hb_008096_040 0.2527971522 - - hypothetical protein PRUPE_ppa001351mg [Prunus persica]
6 Hb_079733_010 0.259982545 - - -
7 Hb_001277_190 0.2750231658 - - hypothetical protein CICLE_v10005534mg [Citrus clementina]
8 Hb_010913_010 0.2760524717 desease resistance Gene Name: NB-ARC PREDICTED: TMV resistance protein N-like [Jatropha curcas]
9 Hb_002272_010 0.2831888093 - - conserved hypothetical protein [Ricinus communis]
10 Hb_001662_030 0.2889436332 - - PREDICTED: F-box protein SKIP23-like [Populus euphratica]
11 Hb_075449_020 0.2901412732 - - PREDICTED: uncharacterized protein LOC105633096 [Jatropha curcas]
12 Hb_076038_010 0.2904395142 - - conserved hypothetical protein [Ricinus communis]
13 Hb_046117_010 0.2926192172 - - PREDICTED: zinc finger A20 and AN1 domain-containing stress-associated protein 3 [Jatropha curcas]
14 Hb_001277_160 0.293739263 - - hypothetical protein MIMGU_mgv1a019742mg, partial [Erythranthe guttata]
15 Hb_002027_380 0.2949245041 - - PREDICTED: secoisolariciresinol dehydrogenase isoform X2 [Jatropha curcas]
16 Hb_000187_030 0.2967400697 - - PREDICTED: cyclin-D4-1-like isoform X2 [Jatropha curcas]
17 Hb_005273_020 0.2975387155 - - -
18 Hb_014720_170 0.2990775573 - - glutaredoxin-1, grx1, putative [Ricinus communis]
19 Hb_000567_040 0.299242005 - - PREDICTED: uncharacterized protein LOC105649657 [Jatropha curcas]
20 Hb_007083_010 0.3019840128 - - PREDICTED: ubiquitin carboxyl-terminal hydrolase 13-like, partial [Nelumbo nucifera]

Gene co-expression network

sample Hb_000826_060 Hb_000826_060 Hb_002232_280 Hb_002232_280 Hb_000826_060--Hb_002232_280 Hb_089140_010 Hb_089140_010 Hb_000826_060--Hb_089140_010 Hb_000627_100 Hb_000627_100 Hb_000826_060--Hb_000627_100 Hb_008096_040 Hb_008096_040 Hb_000826_060--Hb_008096_040 Hb_079733_010 Hb_079733_010 Hb_000826_060--Hb_079733_010 Hb_001277_190 Hb_001277_190 Hb_000826_060--Hb_001277_190 Hb_000390_220 Hb_000390_220 Hb_002232_280--Hb_000390_220 Hb_001662_030 Hb_001662_030 Hb_002232_280--Hb_001662_030 Hb_156144_030 Hb_156144_030 Hb_002232_280--Hb_156144_030 Hb_014720_170 Hb_014720_170 Hb_002232_280--Hb_014720_170 Hb_075449_020 Hb_075449_020 Hb_002232_280--Hb_075449_020 Hb_000904_130 Hb_000904_130 Hb_002232_280--Hb_000904_130 Hb_006907_100 Hb_006907_100 Hb_089140_010--Hb_006907_100 Hb_001898_150 Hb_001898_150 Hb_089140_010--Hb_001898_150 Hb_001711_010 Hb_001711_010 Hb_089140_010--Hb_001711_010 Hb_003776_040 Hb_003776_040 Hb_089140_010--Hb_003776_040 Hb_010913_010 Hb_010913_010 Hb_089140_010--Hb_010913_010 Hb_000567_040 Hb_000567_040 Hb_000627_100--Hb_000567_040 Hb_027428_030 Hb_027428_030 Hb_000627_100--Hb_027428_030 Hb_018599_010 Hb_018599_010 Hb_000627_100--Hb_018599_010 Hb_000627_100--Hb_002232_280 Hb_036227_010 Hb_036227_010 Hb_000627_100--Hb_036227_010 Hb_002272_010 Hb_002272_010 Hb_008096_040--Hb_002272_010 Hb_076038_010 Hb_076038_010 Hb_008096_040--Hb_076038_010 Hb_008096_040--Hb_010913_010 Hb_007181_040 Hb_007181_040 Hb_008096_040--Hb_007181_040 Hb_003225_030 Hb_003225_030 Hb_008096_040--Hb_003225_030 Hb_079733_010--Hb_075449_020 Hb_002027_380 Hb_002027_380 Hb_079733_010--Hb_002027_380 Hb_002326_070 Hb_002326_070 Hb_079733_010--Hb_002326_070 Hb_001493_010 Hb_001493_010 Hb_079733_010--Hb_001493_010 Hb_002316_050 Hb_002316_050 Hb_079733_010--Hb_002316_050 Hb_079733_010--Hb_000390_220 Hb_075230_010 Hb_075230_010 Hb_001277_190--Hb_075230_010 Hb_095575_010 Hb_095575_010 Hb_001277_190--Hb_095575_010 Hb_002196_010 Hb_002196_010 Hb_001277_190--Hb_002196_010 Hb_127404_010 Hb_127404_010 Hb_001277_190--Hb_127404_010 Hb_003913_030 Hb_003913_030 Hb_001277_190--Hb_003913_030 Hb_012634_020 Hb_012634_020 Hb_001277_190--Hb_012634_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0943972 0.105665 0.0391891 0.0401164 0.0483043 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0392402 0.0308676 0 0.0123589 0

CAGE analysis