Hb_007181_040

Information

Type -
Description -
Location Contig7181: 63083-64448
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007181_040 0.0 - - -
2 Hb_007101_010 0.262303186 - - PREDICTED: 2-hydroxyisoflavanone dehydratase-like [Jatropha curcas]
3 Hb_008096_040 0.2637227211 - - hypothetical protein PRUPE_ppa001351mg [Prunus persica]
4 Hb_006120_110 0.2670764402 - - conserved hypothetical protein [Ricinus communis]
5 Hb_001195_080 0.3006470943 - - PREDICTED: uncharacterized protein LOC105633814 [Jatropha curcas]
6 Hb_000826_060 0.3050974721 - - PREDICTED: uncharacterized protein LOC105629655 [Jatropha curcas]
7 Hb_000538_150 0.3199328951 - - PREDICTED: 7-deoxyloganetin glucosyltransferase-like [Jatropha curcas]
8 Hb_062006_010 0.3228257527 - - MULTISPECIES: hypothetical protein, partial [Pseudomonas fluorescens group]
9 Hb_008983_010 0.3231408678 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance RPP13-like protein 1 [Jatropha curcas]
10 Hb_010883_100 0.3267179082 transcription factor TF Family: C2H2 PREDICTED: uncharacterized protein LOC105638892 [Jatropha curcas]
11 Hb_009222_020 0.3268539822 - - hypothetical protein AALP_AA5G087000 [Arabis alpina]
12 Hb_000189_210 0.3325190917 - - hypothetical protein CICLE_v10005534mg [Citrus clementina]
13 Hb_000189_200 0.3335002801 - - hypothetical protein JCGZ_02242 [Jatropha curcas]
14 Hb_004204_090 0.3346188383 - - hypothetical protein JCGZ_11697 [Jatropha curcas]
15 Hb_001277_160 0.3352252862 - - hypothetical protein MIMGU_mgv1a019742mg, partial [Erythranthe guttata]
16 Hb_148891_010 0.3419408492 - - -
17 Hb_001454_240 0.3432019369 - - translationally controlled tumor protein [Hevea brasiliensis]
18 Hb_001001_030 0.3435177205 - - hypothetical protein POPTR_0014s03230g [Populus trichocarpa]
19 Hb_007044_210 0.3480097396 transcription factor TF Family: MYB PREDICTED: protein rough sheath 2 homolog [Populus euphratica]
20 Hb_002272_010 0.3509469796 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_007181_040 Hb_007181_040 Hb_007101_010 Hb_007101_010 Hb_007181_040--Hb_007101_010 Hb_008096_040 Hb_008096_040 Hb_007181_040--Hb_008096_040 Hb_006120_110 Hb_006120_110 Hb_007181_040--Hb_006120_110 Hb_001195_080 Hb_001195_080 Hb_007181_040--Hb_001195_080 Hb_000826_060 Hb_000826_060 Hb_007181_040--Hb_000826_060 Hb_000538_150 Hb_000538_150 Hb_007181_040--Hb_000538_150 Hb_062006_010 Hb_062006_010 Hb_007101_010--Hb_062006_010 Hb_082730_010 Hb_082730_010 Hb_007101_010--Hb_082730_010 Hb_000612_040 Hb_000612_040 Hb_007101_010--Hb_000612_040 Hb_000224_100 Hb_000224_100 Hb_007101_010--Hb_000224_100 Hb_056559_010 Hb_056559_010 Hb_007101_010--Hb_056559_010 Hb_008096_040--Hb_000826_060 Hb_002272_010 Hb_002272_010 Hb_008096_040--Hb_002272_010 Hb_076038_010 Hb_076038_010 Hb_008096_040--Hb_076038_010 Hb_010913_010 Hb_010913_010 Hb_008096_040--Hb_010913_010 Hb_003225_030 Hb_003225_030 Hb_008096_040--Hb_003225_030 Hb_073973_140 Hb_073973_140 Hb_006120_110--Hb_073973_140 Hb_001454_240 Hb_001454_240 Hb_006120_110--Hb_001454_240 Hb_024682_020 Hb_024682_020 Hb_006120_110--Hb_024682_020 Hb_006120_110--Hb_002272_010 Hb_000270_440 Hb_000270_440 Hb_006120_110--Hb_000270_440 Hb_000624_020 Hb_000624_020 Hb_001195_080--Hb_000624_020 Hb_176844_010 Hb_176844_010 Hb_001195_080--Hb_176844_010 Hb_002847_020 Hb_002847_020 Hb_001195_080--Hb_002847_020 Hb_001077_020 Hb_001077_020 Hb_001195_080--Hb_001077_020 Hb_001449_060 Hb_001449_060 Hb_001195_080--Hb_001449_060 Hb_002232_280 Hb_002232_280 Hb_000826_060--Hb_002232_280 Hb_089140_010 Hb_089140_010 Hb_000826_060--Hb_089140_010 Hb_000627_100 Hb_000627_100 Hb_000826_060--Hb_000627_100 Hb_079733_010 Hb_079733_010 Hb_000826_060--Hb_079733_010 Hb_001277_190 Hb_001277_190 Hb_000826_060--Hb_001277_190 Hb_000614_330 Hb_000614_330 Hb_000538_150--Hb_000614_330 Hb_007044_210 Hb_007044_210 Hb_000538_150--Hb_007044_210 Hb_027380_040 Hb_027380_040 Hb_000538_150--Hb_027380_040 Hb_000613_200 Hb_000613_200 Hb_000538_150--Hb_000613_200 Hb_005298_040 Hb_005298_040 Hb_000538_150--Hb_005298_040 Hb_005545_030 Hb_005545_030 Hb_000538_150--Hb_005545_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.599694 0.317075 0 0.136134 0.0867583 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.406353 0.159593 0 0.0685189 0

CAGE analysis