Hb_056559_010

Information

Type -
Description -
Location Contig56559: 751-1424
Sequence    

Annotation

kegg
ID cic:CICLE_v10009303mg
description hypothetical protein
nr
ID XP_009591594.1
description PREDICTED: uncharacterized protein LOC104088595 [Nicotiana tomentosiformis]
swissprot
ID -
description -
trembl
ID A0A067KS27
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00694 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_056559_010 0.0 - - PREDICTED: uncharacterized protein LOC104088595 [Nicotiana tomentosiformis]
2 Hb_007101_010 0.3247403663 - - PREDICTED: 2-hydroxyisoflavanone dehydratase-like [Jatropha curcas]
3 Hb_033870_010 0.3333147414 - - PREDICTED: uncharacterized protein LOC104101109 isoform X1 [Nicotiana tomentosiformis]
4 Hb_000329_260 0.3410509501 - - hypothetical protein MIMGU_mgv1a016162mg [Erythranthe guttata]
5 Hb_113733_010 0.3438221225 - - hypothetical protein JCGZ_26531 [Jatropha curcas]
6 Hb_000035_280 0.3448236914 - - PREDICTED: pentatricopeptide repeat-containing protein At3g29230-like [Jatropha curcas]
7 Hb_000174_010 0.3485755058 - - PREDICTED: uncharacterized protein LOC103444904 [Malus domestica]
8 Hb_001417_080 0.350052342 - - Calmodulin, putative [Ricinus communis]
9 Hb_000224_100 0.3637316916 - - -
10 Hb_001979_030 0.3655475833 - - hypothetical protein POPTR_0016s06130g [Populus trichocarpa]
11 Hb_033546_020 0.3691810873 - - xenotropic and polytropic murine leukemia virus receptor pho1, putative [Ricinus communis]
12 Hb_003996_030 0.3703948401 - - -
13 Hb_000794_040 0.3706677723 - - PREDICTED: RING-H2 finger protein ATL29-like [Jatropha curcas]
14 Hb_001864_090 0.3741856776 - - -
15 Hb_003098_010 0.3765321193 - - -
16 Hb_034482_010 0.3816913673 - - conserved hypothetical protein [Ricinus communis]
17 Hb_000895_080 0.3819485615 - - PREDICTED: acyl-CoA--sterol O-acyltransferase 1-like [Jatropha curcas]
18 Hb_006120_090 0.3824699097 - - PREDICTED: desiccation-related protein PCC13-62-like [Jatropha curcas]
19 Hb_001894_080 0.3889023429 - - ATP binding protein, putative [Ricinus communis]
20 Hb_000032_050 0.3926105894 - - hypothetical protein RCOM_1691130 [Ricinus communis]

Gene co-expression network

sample Hb_056559_010 Hb_056559_010 Hb_007101_010 Hb_007101_010 Hb_056559_010--Hb_007101_010 Hb_033870_010 Hb_033870_010 Hb_056559_010--Hb_033870_010 Hb_000329_260 Hb_000329_260 Hb_056559_010--Hb_000329_260 Hb_113733_010 Hb_113733_010 Hb_056559_010--Hb_113733_010 Hb_000035_280 Hb_000035_280 Hb_056559_010--Hb_000035_280 Hb_000174_010 Hb_000174_010 Hb_056559_010--Hb_000174_010 Hb_062006_010 Hb_062006_010 Hb_007101_010--Hb_062006_010 Hb_007181_040 Hb_007181_040 Hb_007101_010--Hb_007181_040 Hb_082730_010 Hb_082730_010 Hb_007101_010--Hb_082730_010 Hb_000612_040 Hb_000612_040 Hb_007101_010--Hb_000612_040 Hb_000224_100 Hb_000224_100 Hb_007101_010--Hb_000224_100 Hb_033870_010--Hb_000329_260 Hb_000895_080 Hb_000895_080 Hb_033870_010--Hb_000895_080 Hb_000032_050 Hb_000032_050 Hb_033870_010--Hb_000032_050 Hb_001864_090 Hb_001864_090 Hb_033870_010--Hb_001864_090 Hb_001417_080 Hb_001417_080 Hb_033870_010--Hb_001417_080 Hb_033546_020 Hb_033546_020 Hb_033870_010--Hb_033546_020 Hb_001979_030 Hb_001979_030 Hb_000329_260--Hb_001979_030 Hb_000329_260--Hb_001417_080 Hb_000329_260--Hb_001864_090 Hb_000136_160 Hb_000136_160 Hb_000329_260--Hb_000136_160 Hb_000329_260--Hb_000032_050 Hb_168418_010 Hb_168418_010 Hb_113733_010--Hb_168418_010 Hb_003073_140 Hb_003073_140 Hb_113733_010--Hb_003073_140 Hb_065642_010 Hb_065642_010 Hb_113733_010--Hb_065642_010 Hb_007849_030 Hb_007849_030 Hb_113733_010--Hb_007849_030 Hb_019762_040 Hb_019762_040 Hb_113733_010--Hb_019762_040 Hb_031862_050 Hb_031862_050 Hb_113733_010--Hb_031862_050 Hb_003098_010 Hb_003098_010 Hb_000035_280--Hb_003098_010 Hb_113084_010 Hb_113084_010 Hb_000035_280--Hb_113084_010 Hb_118228_010 Hb_118228_010 Hb_000035_280--Hb_118228_010 Hb_000045_280 Hb_000045_280 Hb_000035_280--Hb_000045_280 Hb_002893_120 Hb_002893_120 Hb_000035_280--Hb_002893_120 Hb_004785_050 Hb_004785_050 Hb_000035_280--Hb_004785_050 Hb_006120_090 Hb_006120_090 Hb_000174_010--Hb_006120_090 Hb_000174_010--Hb_001979_030 Hb_078804_010 Hb_078804_010 Hb_000174_010--Hb_078804_010 Hb_000174_010--Hb_001864_090 Hb_000445_170 Hb_000445_170 Hb_000174_010--Hb_000445_170
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.431572 0 0 0.447573 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.237866 0.186887 0 0.0817514 0

CAGE analysis