Hb_002893_120

Information

Type -
Description -
Location Contig2893: 77791-78377
Sequence    

Annotation

kegg
ID rcu:RCOM_1053560
description hypothetical protein
nr
ID XP_012076658.1
description PREDICTED: uncharacterized protein LOC105637692 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KMZ2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07216 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_30276: 77721-78201
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002893_120 0.0 - - PREDICTED: uncharacterized protein LOC105637692 [Jatropha curcas]
2 Hb_000207_380 0.1905793822 - - sucrose transporter 6 [Hevea brasiliensis]
3 Hb_032208_070 0.2147614484 - - PREDICTED: probable polyamine transporter At3g13620 isoform X2 [Jatropha curcas]
4 Hb_014783_010 0.2156713792 - - cold-inducible RNA binding protein, putative [Ricinus communis]
5 Hb_000224_200 0.2185204406 - - PREDICTED: uncharacterized protein LOC105640874 [Jatropha curcas]
6 Hb_164926_020 0.2230629898 - - PREDICTED: uncharacterized protein LOC105645601 [Jatropha curcas]
7 Hb_003371_180 0.2280552378 - - -
8 Hb_000220_130 0.2296299435 - - Phosphatidyl serine synthase family protein isoform 1 [Theobroma cacao]
9 Hb_000099_230 0.2297853829 - - PREDICTED: F-box protein SKIP19-like [Gossypium raimondii]
10 Hb_007904_090 0.2310861737 - - PREDICTED: uncharacterized protein LOC100261196 [Vitis vinifera]
11 Hb_002027_020 0.2312794335 - - PREDICTED: uncharacterized protein LOC105650039 [Jatropha curcas]
12 Hb_077354_010 0.233645988 - - PREDICTED: uncharacterized protein LOC105637567 [Jatropha curcas]
13 Hb_000788_130 0.235779081 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance protein At4g27190-like [Jatropha curcas]
14 Hb_001357_100 0.2388313868 - - PREDICTED: small ubiquitin-related modifier 1 [Jatropha curcas]
15 Hb_000316_130 0.2420572855 - - PREDICTED: uncharacterized protein LOC105647693 [Jatropha curcas]
16 Hb_000376_160 0.2447590318 - - -
17 Hb_003206_120 0.245842048 - - PREDICTED: glutamate decarboxylase 5-like [Jatropha curcas]
18 Hb_068804_150 0.2472998343 - - conserved hypothetical protein [Ricinus communis]
19 Hb_000160_130 0.2511760289 - - PREDICTED: uncharacterized protein LOC105648215 [Jatropha curcas]
20 Hb_003497_040 0.251212469 - - ATP binding protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_002893_120 Hb_002893_120 Hb_000207_380 Hb_000207_380 Hb_002893_120--Hb_000207_380 Hb_032208_070 Hb_032208_070 Hb_002893_120--Hb_032208_070 Hb_014783_010 Hb_014783_010 Hb_002893_120--Hb_014783_010 Hb_000224_200 Hb_000224_200 Hb_002893_120--Hb_000224_200 Hb_164926_020 Hb_164926_020 Hb_002893_120--Hb_164926_020 Hb_003371_180 Hb_003371_180 Hb_002893_120--Hb_003371_180 Hb_000982_070 Hb_000982_070 Hb_000207_380--Hb_000982_070 Hb_007140_020 Hb_007140_020 Hb_000207_380--Hb_007140_020 Hb_002603_130 Hb_002603_130 Hb_000207_380--Hb_002603_130 Hb_000922_170 Hb_000922_170 Hb_000207_380--Hb_000922_170 Hb_000384_130 Hb_000384_130 Hb_000207_380--Hb_000384_130 Hb_000207_380--Hb_164926_020 Hb_032808_020 Hb_032808_020 Hb_032208_070--Hb_032808_020 Hb_000261_020 Hb_000261_020 Hb_032208_070--Hb_000261_020 Hb_000053_110 Hb_000053_110 Hb_032208_070--Hb_000053_110 Hb_007760_040 Hb_007760_040 Hb_032208_070--Hb_007760_040 Hb_003749_010 Hb_003749_010 Hb_032208_070--Hb_003749_010 Hb_004195_270 Hb_004195_270 Hb_032208_070--Hb_004195_270 Hb_000268_010 Hb_000268_010 Hb_014783_010--Hb_000268_010 Hb_000186_190 Hb_000186_190 Hb_014783_010--Hb_000186_190 Hb_003943_130 Hb_003943_130 Hb_014783_010--Hb_003943_130 Hb_002289_120 Hb_002289_120 Hb_014783_010--Hb_002289_120 Hb_001357_100 Hb_001357_100 Hb_014783_010--Hb_001357_100 Hb_000101_270 Hb_000101_270 Hb_014783_010--Hb_000101_270 Hb_000224_200--Hb_014783_010 Hb_002809_130 Hb_002809_130 Hb_000224_200--Hb_002809_130 Hb_000167_060 Hb_000167_060 Hb_000224_200--Hb_000167_060 Hb_019249_010 Hb_019249_010 Hb_000224_200--Hb_019249_010 Hb_000224_200--Hb_003371_180 Hb_002900_160 Hb_002900_160 Hb_000224_200--Hb_002900_160 Hb_004116_080 Hb_004116_080 Hb_164926_020--Hb_004116_080 Hb_164926_020--Hb_000384_130 Hb_009787_040 Hb_009787_040 Hb_164926_020--Hb_009787_040 Hb_000948_210 Hb_000948_210 Hb_164926_020--Hb_000948_210 Hb_164926_020--Hb_000922_170 Hb_000510_110 Hb_000510_110 Hb_164926_020--Hb_000510_110 Hb_003371_180--Hb_019249_010 Hb_000788_130 Hb_000788_130 Hb_003371_180--Hb_000788_130 Hb_181288_010 Hb_181288_010 Hb_003371_180--Hb_181288_010 Hb_000465_040 Hb_000465_040 Hb_003371_180--Hb_000465_040 Hb_010407_040 Hb_010407_040 Hb_003371_180--Hb_010407_040 Hb_013405_060 Hb_013405_060 Hb_003371_180--Hb_013405_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
11.1199 2.0756 2.68091 6.65981 2.51549 1.82016
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
9.48037 10.3811 0.568507 0.141297 1.88067

CAGE analysis