Hb_000224_200

Information

Type -
Description -
Location Contig224: 152766-153386
Sequence    

Annotation

kegg
ID rcu:RCOM_0511430
description hypothetical protein
nr
ID XP_012080666.1
description PREDICTED: uncharacterized protein LOC105640874 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067K3Y5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13770 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000224_200 0.0 - - PREDICTED: uncharacterized protein LOC105640874 [Jatropha curcas]
2 Hb_014783_010 0.1554345729 - - cold-inducible RNA binding protein, putative [Ricinus communis]
3 Hb_002809_130 0.156013921 - - mads box protein, putative [Ricinus communis]
4 Hb_000167_060 0.16181491 - - PREDICTED: U11/U12 small nuclear ribonucleoprotein 31 kDa protein [Jatropha curcas]
5 Hb_019249_010 0.1650923144 - - PREDICTED: origin of replication complex subunit 2 [Jatropha curcas]
6 Hb_003371_180 0.1654174986 - - -
7 Hb_002900_160 0.1704862474 - - PREDICTED: immediate early response 3-interacting protein 1-like [Jatropha curcas]
8 Hb_002289_120 0.1706336573 - - PREDICTED: uncharacterized protein LOC105645218 isoform X2 [Jatropha curcas]
9 Hb_033594_110 0.170786053 - - NADH-ubiquinone oxidoreductase 18 kDa subunit, mitochondrial precursor, putative [Ricinus communis]
10 Hb_002226_040 0.1728732328 - - PREDICTED: uncharacterized protein LOC105641318 isoform X2 [Jatropha curcas]
11 Hb_000679_300 0.1731191324 - - PREDICTED: uncharacterized protein LOC105637628 isoform X2 [Jatropha curcas]
12 Hb_077354_010 0.1751327962 - - PREDICTED: uncharacterized protein LOC105637567 [Jatropha curcas]
13 Hb_010815_030 0.1753751769 - - PREDICTED: (-)-germacrene D synthase [Vitis vinifera]
14 Hb_000630_060 0.1758415272 - - PREDICTED: iron-sulfur assembly protein IscA-like 1, mitochondrial [Jatropha curcas]
15 Hb_003943_130 0.178885536 - - PREDICTED: uncharacterized protein LOC105636341 [Jatropha curcas]
16 Hb_001214_140 0.1798190759 - - 60S ribosomal protein L27a, putative [Ricinus communis]
17 Hb_003405_060 0.1814451054 - - -
18 Hb_181288_010 0.1833565763 - - rac-GTP binding protein, putative [Ricinus communis]
19 Hb_001814_070 0.1834031715 - - PREDICTED: uncharacterized protein LOC105650638 [Jatropha curcas]
20 Hb_000451_060 0.1840404938 - - hypothetical protein CICLE_v10010074mg [Citrus clementina]

Gene co-expression network

sample Hb_000224_200 Hb_000224_200 Hb_014783_010 Hb_014783_010 Hb_000224_200--Hb_014783_010 Hb_002809_130 Hb_002809_130 Hb_000224_200--Hb_002809_130 Hb_000167_060 Hb_000167_060 Hb_000224_200--Hb_000167_060 Hb_019249_010 Hb_019249_010 Hb_000224_200--Hb_019249_010 Hb_003371_180 Hb_003371_180 Hb_000224_200--Hb_003371_180 Hb_002900_160 Hb_002900_160 Hb_000224_200--Hb_002900_160 Hb_000268_010 Hb_000268_010 Hb_014783_010--Hb_000268_010 Hb_000186_190 Hb_000186_190 Hb_014783_010--Hb_000186_190 Hb_003943_130 Hb_003943_130 Hb_014783_010--Hb_003943_130 Hb_002289_120 Hb_002289_120 Hb_014783_010--Hb_002289_120 Hb_001357_100 Hb_001357_100 Hb_014783_010--Hb_001357_100 Hb_000101_270 Hb_000101_270 Hb_014783_010--Hb_000101_270 Hb_007441_300 Hb_007441_300 Hb_002809_130--Hb_007441_300 Hb_029584_060 Hb_029584_060 Hb_002809_130--Hb_029584_060 Hb_017491_060 Hb_017491_060 Hb_002809_130--Hb_017491_060 Hb_002609_210 Hb_002609_210 Hb_002809_130--Hb_002609_210 Hb_003125_190 Hb_003125_190 Hb_002809_130--Hb_003125_190 Hb_003126_090 Hb_003126_090 Hb_002809_130--Hb_003126_090 Hb_000167_060--Hb_003943_130 Hb_005667_040 Hb_005667_040 Hb_000167_060--Hb_005667_040 Hb_020581_010 Hb_020581_010 Hb_000167_060--Hb_020581_010 Hb_004223_220 Hb_004223_220 Hb_000167_060--Hb_004223_220 Hb_000167_060--Hb_019249_010 Hb_000167_060--Hb_002289_120 Hb_181288_010 Hb_181288_010 Hb_019249_010--Hb_181288_010 Hb_128048_010 Hb_128048_010 Hb_019249_010--Hb_128048_010 Hb_019249_010--Hb_002289_120 Hb_001814_070 Hb_001814_070 Hb_019249_010--Hb_001814_070 Hb_001817_090 Hb_001817_090 Hb_019249_010--Hb_001817_090 Hb_003878_010 Hb_003878_010 Hb_019249_010--Hb_003878_010 Hb_003371_180--Hb_019249_010 Hb_000788_130 Hb_000788_130 Hb_003371_180--Hb_000788_130 Hb_003371_180--Hb_181288_010 Hb_000465_040 Hb_000465_040 Hb_003371_180--Hb_000465_040 Hb_010407_040 Hb_010407_040 Hb_003371_180--Hb_010407_040 Hb_013405_060 Hb_013405_060 Hb_003371_180--Hb_013405_060 Hb_000000_170 Hb_000000_170 Hb_002900_160--Hb_000000_170 Hb_002783_270 Hb_002783_270 Hb_002900_160--Hb_002783_270 Hb_003018_020 Hb_003018_020 Hb_002900_160--Hb_003018_020 Hb_004052_020 Hb_004052_020 Hb_002900_160--Hb_004052_020 Hb_000699_160 Hb_000699_160 Hb_002900_160--Hb_000699_160 Hb_007044_130 Hb_007044_130 Hb_002900_160--Hb_007044_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
33.4923 30.6291 27.0406 59.8129 36.3808 39.7685
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
113.157 135.934 11.9328 5.27952 20.6944

CAGE analysis