Hb_113733_010

Information

Type -
Description -
Location Contig113733: 2-807
Sequence    

Annotation

kegg
ID -
description -
nr
ID KDP24664.1
description hypothetical protein JCGZ_26531 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JYR1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26531 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_113733_010 0.0 - - hypothetical protein JCGZ_26531 [Jatropha curcas]
2 Hb_168418_010 0.2351050312 - - PREDICTED: uncharacterized protein LOC104234330 [Nicotiana sylvestris]
3 Hb_003073_140 0.2984173524 - - F-box family protein [Theobroma cacao]
4 Hb_065642_010 0.3235902475 - - -
5 Hb_007849_030 0.328222751 - - l-allo-threonine aldolase, putative [Ricinus communis]
6 Hb_019762_040 0.3394141837 - - conserved hypothetical protein [Ricinus communis]
7 Hb_031862_050 0.3397005449 - - Cell division cycle protein, putative [Ricinus communis]
8 Hb_004584_010 0.3403800553 - - PREDICTED: uncharacterized protein LOC104094989 [Nicotiana tomentosiformis]
9 Hb_000260_450 0.3406614197 - - GTP binding protein, putative [Ricinus communis]
10 Hb_056559_010 0.3438221225 - - PREDICTED: uncharacterized protein LOC104088595 [Nicotiana tomentosiformis]
11 Hb_004696_050 0.3497788163 - - -
12 Hb_007044_210 0.3602124717 transcription factor TF Family: MYB PREDICTED: protein rough sheath 2 homolog [Populus euphratica]
13 Hb_007101_010 0.365496745 - - PREDICTED: 2-hydroxyisoflavanone dehydratase-like [Jatropha curcas]
14 Hb_027751_030 0.3659879042 - - -
15 Hb_001066_010 0.3682621304 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
16 Hb_013394_020 0.3683214936 - - PREDICTED: putative laccase-9 [Vitis vinifera]
17 Hb_010588_010 0.3683769023 - - -
18 Hb_035905_010 0.368445018 - - PREDICTED: uncharacterized protein LOC105627956 [Jatropha curcas]
19 Hb_002615_100 0.3693131212 - - -
20 Hb_000442_090 0.3729108651 - - PREDICTED: protein EARLY RESPONSIVE TO DEHYDRATION 15-like [Jatropha curcas]

Gene co-expression network

sample Hb_113733_010 Hb_113733_010 Hb_168418_010 Hb_168418_010 Hb_113733_010--Hb_168418_010 Hb_003073_140 Hb_003073_140 Hb_113733_010--Hb_003073_140 Hb_065642_010 Hb_065642_010 Hb_113733_010--Hb_065642_010 Hb_007849_030 Hb_007849_030 Hb_113733_010--Hb_007849_030 Hb_019762_040 Hb_019762_040 Hb_113733_010--Hb_019762_040 Hb_031862_050 Hb_031862_050 Hb_113733_010--Hb_031862_050 Hb_168418_010--Hb_031862_050 Hb_010588_010 Hb_010588_010 Hb_168418_010--Hb_010588_010 Hb_029162_020 Hb_029162_020 Hb_168418_010--Hb_029162_020 Hb_002750_020 Hb_002750_020 Hb_168418_010--Hb_002750_020 Hb_048610_010 Hb_048610_010 Hb_168418_010--Hb_048610_010 Hb_010098_070 Hb_010098_070 Hb_003073_140--Hb_010098_070 Hb_004724_040 Hb_004724_040 Hb_003073_140--Hb_004724_040 Hb_000295_120 Hb_000295_120 Hb_003073_140--Hb_000295_120 Hb_015807_140 Hb_015807_140 Hb_003073_140--Hb_015807_140 Hb_006469_060 Hb_006469_060 Hb_003073_140--Hb_006469_060 Hb_008066_040 Hb_008066_040 Hb_003073_140--Hb_008066_040 Hb_000046_020 Hb_000046_020 Hb_065642_010--Hb_000046_020 Hb_002843_190 Hb_002843_190 Hb_065642_010--Hb_002843_190 Hb_007044_210 Hb_007044_210 Hb_065642_010--Hb_007044_210 Hb_003018_110 Hb_003018_110 Hb_065642_010--Hb_003018_110 Hb_028365_010 Hb_028365_010 Hb_065642_010--Hb_028365_010 Hb_000373_290 Hb_000373_290 Hb_065642_010--Hb_000373_290 Hb_002477_230 Hb_002477_230 Hb_007849_030--Hb_002477_230 Hb_001980_020 Hb_001980_020 Hb_007849_030--Hb_001980_020 Hb_003253_010 Hb_003253_010 Hb_007849_030--Hb_003253_010 Hb_175445_010 Hb_175445_010 Hb_007849_030--Hb_175445_010 Hb_007810_050 Hb_007810_050 Hb_007849_030--Hb_007810_050 Hb_003777_070 Hb_003777_070 Hb_007849_030--Hb_003777_070 Hb_124055_010 Hb_124055_010 Hb_019762_040--Hb_124055_010 Hb_000635_140 Hb_000635_140 Hb_019762_040--Hb_000635_140 Hb_000561_020 Hb_000561_020 Hb_019762_040--Hb_000561_020 Hb_003943_130 Hb_003943_130 Hb_019762_040--Hb_003943_130 Hb_000268_010 Hb_000268_010 Hb_019762_040--Hb_000268_010 Hb_014783_010 Hb_014783_010 Hb_019762_040--Hb_014783_010 Hb_001230_010 Hb_001230_010 Hb_031862_050--Hb_001230_010 Hb_002007_290 Hb_002007_290 Hb_031862_050--Hb_002007_290 Hb_031862_050--Hb_000046_020 Hb_031862_050--Hb_029162_020 Hb_031862_050--Hb_048610_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.285825 0 0 0.0636286 0 0.0630251
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0820469 0.193498 0 0.0525094 0

CAGE analysis