Hb_010588_010

Information

Type -
Description -
Location Contig10588: 10561-11468
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010588_010 0.0 - - -
2 Hb_001186_050 0.1800001948 - - -
3 Hb_002741_030 0.1848882156 - - -
4 Hb_036285_010 0.1981407699 - - -
5 Hb_168418_010 0.2277921257 - - PREDICTED: uncharacterized protein LOC104234330 [Nicotiana sylvestris]
6 Hb_002205_200 0.2308459274 - - PREDICTED: uncharacterized protein LOC105649174 [Jatropha curcas]
7 Hb_174107_010 0.2454440881 - - PREDICTED: uncharacterized protein LOC105775323 [Gossypium raimondii]
8 Hb_145890_010 0.247913924 - - unnamed protein product [Vitis vinifera]
9 Hb_004116_110 0.2533040744 - - hypothetical protein MTR_3g064100 [Medicago truncatula]
10 Hb_030765_010 0.2568034769 desease resistance Gene Name: ABC_tran PREDICTED: ABC transporter G family member 11-like isoform X1 [Solanum lycopersicum]
11 Hb_031862_050 0.2661703895 - - Cell division cycle protein, putative [Ricinus communis]
12 Hb_000046_020 0.2865532426 - - -
13 Hb_029162_020 0.2874017398 - - -
14 Hb_007574_060 0.2896583998 transcription factor TF Family: LOB PREDICTED: LOB domain-containing protein 27-like [Jatropha curcas]
15 Hb_002235_220 0.2934264181 - - PREDICTED: pectinesterase 31-like [Jatropha curcas]
16 Hb_010128_110 0.2954080233 - - PREDICTED: uncharacterized protein LOC105632071 [Jatropha curcas]
17 Hb_000373_300 0.3021084963 - - hypothetical protein F775_20382 [Aegilops tauschii]
18 Hb_048610_010 0.3045300246 - - -
19 Hb_114839_010 0.3085690501 - - -
20 Hb_188382_010 0.3086811342 - - Ran GTPase binding protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_010588_010 Hb_010588_010 Hb_001186_050 Hb_001186_050 Hb_010588_010--Hb_001186_050 Hb_002741_030 Hb_002741_030 Hb_010588_010--Hb_002741_030 Hb_036285_010 Hb_036285_010 Hb_010588_010--Hb_036285_010 Hb_168418_010 Hb_168418_010 Hb_010588_010--Hb_168418_010 Hb_002205_200 Hb_002205_200 Hb_010588_010--Hb_002205_200 Hb_174107_010 Hb_174107_010 Hb_010588_010--Hb_174107_010 Hb_001186_050--Hb_002741_030 Hb_145890_010 Hb_145890_010 Hb_001186_050--Hb_145890_010 Hb_030765_010 Hb_030765_010 Hb_001186_050--Hb_030765_010 Hb_000275_010 Hb_000275_010 Hb_001186_050--Hb_000275_010 Hb_000373_300 Hb_000373_300 Hb_001186_050--Hb_000373_300 Hb_002741_030--Hb_145890_010 Hb_002741_030--Hb_000373_300 Hb_002741_030--Hb_000275_010 Hb_002741_030--Hb_030765_010 Hb_036285_010--Hb_002205_200 Hb_036285_010--Hb_174107_010 Hb_166548_010 Hb_166548_010 Hb_036285_010--Hb_166548_010 Hb_001981_080 Hb_001981_080 Hb_036285_010--Hb_001981_080 Hb_021888_110 Hb_021888_110 Hb_036285_010--Hb_021888_110 Hb_031862_050 Hb_031862_050 Hb_168418_010--Hb_031862_050 Hb_113733_010 Hb_113733_010 Hb_168418_010--Hb_113733_010 Hb_029162_020 Hb_029162_020 Hb_168418_010--Hb_029162_020 Hb_002750_020 Hb_002750_020 Hb_168418_010--Hb_002750_020 Hb_048610_010 Hb_048610_010 Hb_168418_010--Hb_048610_010 Hb_162999_010 Hb_162999_010 Hb_002205_200--Hb_162999_010 Hb_002205_200--Hb_174107_010 Hb_002205_200--Hb_030765_010 Hb_001095_060 Hb_001095_060 Hb_002205_200--Hb_001095_060 Hb_002153_010 Hb_002153_010 Hb_174107_010--Hb_002153_010 Hb_174107_010--Hb_162999_010 Hb_004116_110 Hb_004116_110 Hb_174107_010--Hb_004116_110 Hb_001488_110 Hb_001488_110 Hb_174107_010--Hb_001488_110 Hb_174107_010--Hb_001095_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0962412 0 0 0 0 0.104291
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0880848 0.138479 0 0 0

CAGE analysis