Hb_001488_110

Information

Type -
Description -
Location Contig1488: 75366-75605
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID GO:0016740
description udp-glycosyltransferase 83a1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001488_110 0.0 - - -
2 Hb_077562_040 0.1373349355 - - hypothetical protein JCGZ_24573 [Jatropha curcas]
3 Hb_027445_060 0.1450691616 - - PREDICTED: pescadillo homolog isoform X1 [Jatropha curcas]
4 Hb_000184_120 0.14542429 - - hypothetical protein JCGZ_18526 [Jatropha curcas]
5 Hb_068946_010 0.1494888857 - - hypothetical protein CICLE_v100122621mg, partial [Citrus clementina]
6 Hb_004025_030 0.1523069078 - - -
7 Hb_000563_530 0.1691340151 - - PREDICTED: uncharacterized protein LOC105643453 [Jatropha curcas]
8 Hb_001095_060 0.1718408049 - - Uncharacterized protein TCM_012505 [Theobroma cacao]
9 Hb_115919_010 0.1767737984 - - unknown [Lotus japonicus]
10 Hb_135403_010 0.1772569699 - - HEV1.1 [Hevea brasiliensis]
11 Hb_000122_030 0.1779946387 - - PREDICTED: uncharacterized protein LOC104606081, partial [Nelumbo nucifera]
12 Hb_162999_010 0.1782110476 - - MULTISPECIES: hypothetical protein, partial [Pseudomonas fluorescens group]
13 Hb_023675_010 0.1812279699 - - -
14 Hb_002153_010 0.1837496684 - - hypothetical protein B456_002G103400 [Gossypium raimondii]
15 Hb_004502_050 0.1858947764 - - hypothetical protein POPTR_1488s00200g [Populus trichocarpa]
16 Hb_121236_010 0.1867239744 - - geranyl-diphosphate synthase [Hevea brasiliensis]
17 Hb_033448_010 0.1923471617 - - hypothetical protein JCGZ_19772 [Jatropha curcas]
18 Hb_005305_060 0.1941038111 - - hypothetical protein MIMGU_mgv1a015111mg [Erythranthe guttata]
19 Hb_120221_010 0.1971390803 - - -
20 Hb_000914_060 0.1987087034 transcription factor TF Family: AP2 PREDICTED: AP2-like ethylene-responsive transcription factor PLT1 [Populus euphratica]

Gene co-expression network

sample Hb_001488_110 Hb_001488_110 Hb_077562_040 Hb_077562_040 Hb_001488_110--Hb_077562_040 Hb_027445_060 Hb_027445_060 Hb_001488_110--Hb_027445_060 Hb_000184_120 Hb_000184_120 Hb_001488_110--Hb_000184_120 Hb_068946_010 Hb_068946_010 Hb_001488_110--Hb_068946_010 Hb_004025_030 Hb_004025_030 Hb_001488_110--Hb_004025_030 Hb_000563_530 Hb_000563_530 Hb_001488_110--Hb_000563_530 Hb_077562_040--Hb_000184_120 Hb_023675_010 Hb_023675_010 Hb_077562_040--Hb_023675_010 Hb_077562_040--Hb_004025_030 Hb_077562_040--Hb_000563_530 Hb_000366_100 Hb_000366_100 Hb_077562_040--Hb_000366_100 Hb_121236_010 Hb_121236_010 Hb_027445_060--Hb_121236_010 Hb_115919_010 Hb_115919_010 Hb_027445_060--Hb_115919_010 Hb_027445_060--Hb_068946_010 Hb_001095_060 Hb_001095_060 Hb_027445_060--Hb_001095_060 Hb_003813_100 Hb_003813_100 Hb_027445_060--Hb_003813_100 Hb_005305_060 Hb_005305_060 Hb_027445_060--Hb_005305_060 Hb_002200_120 Hb_002200_120 Hb_000184_120--Hb_002200_120 Hb_000184_120--Hb_000563_530 Hb_033448_010 Hb_033448_010 Hb_000184_120--Hb_033448_010 Hb_000184_120--Hb_004025_030 Hb_000369_090 Hb_000369_090 Hb_000184_120--Hb_000369_090 Hb_068946_010--Hb_001095_060 Hb_004072_010 Hb_004072_010 Hb_068946_010--Hb_004072_010 Hb_004968_060 Hb_004968_060 Hb_068946_010--Hb_004968_060 Hb_005935_010 Hb_005935_010 Hb_068946_010--Hb_005935_010 Hb_004025_030--Hb_023675_010 Hb_004025_030--Hb_000563_530 Hb_004375_060 Hb_004375_060 Hb_004025_030--Hb_004375_060 Hb_004025_030--Hb_027445_060 Hb_000563_530--Hb_033448_010 Hb_000563_530--Hb_002200_120 Hb_000563_530--Hb_000369_090 Hb_000563_530--Hb_000366_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
7.10102 0.900094 0 0 7.62614 31.0387
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
13.596 15.3701 2.81415 0.803009 0

CAGE analysis