Hb_023675_010

Information

Type -
Description -
Location Contig23675: 2439-6056
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_023675_010 0.0 - - -
2 Hb_000366_100 0.0919839176 - - 60S ribosomal protein L7aA [Hevea brasiliensis]
3 Hb_036369_010 0.0935405852 - - -
4 Hb_004852_020 0.0983327611 - - -
5 Hb_077562_040 0.101961669 - - hypothetical protein JCGZ_24573 [Jatropha curcas]
6 Hb_001248_020 0.1104875016 - - PREDICTED: uncharacterized protein At2g23090-like [Jatropha curcas]
7 Hb_012395_100 0.1113933561 - - eukaryotic translation initiation factor 4e, putative [Ricinus communis]
8 Hb_007317_220 0.1124247119 - - hypothetical protein JCGZ_12701 [Jatropha curcas]
9 Hb_000175_520 0.1144973037 - - ubiquitin-protein ligase, putative [Ricinus communis]
10 Hb_003398_060 0.1163988056 - - PREDICTED: rRNA methyltransferase 2, mitochondrial isoform X1 [Jatropha curcas]
11 Hb_002863_010 0.1177698988 - - PREDICTED: probable E3 ubiquitin-protein ligase RNF144A-B [Jatropha curcas]
12 Hb_008016_010 0.1230033118 - - PREDICTED: protein LURP-one-related 15-like isoform X1 [Jatropha curcas]
13 Hb_170305_020 0.1293484091 - - hypothetical protein JCGZ_23578 [Jatropha curcas]
14 Hb_002942_030 0.1327083204 - - hypothetical protein EUGRSUZ_K000651 [Eucalyptus grandis]
15 Hb_017895_050 0.1346390383 - - PREDICTED: LOW QUALITY PROTEIN: UPF0160 protein MYG1, mitochondrial [Jatropha curcas]
16 Hb_004025_030 0.1387952087 - - -
17 Hb_003453_010 0.1389084701 - - conserved hypothetical protein [Ricinus communis]
18 Hb_000933_140 0.1395828965 - - PREDICTED: uncharacterized protein LOC105630501 [Jatropha curcas]
19 Hb_033448_010 0.1410624371 - - hypothetical protein JCGZ_19772 [Jatropha curcas]
20 Hb_073973_110 0.1419237595 - - PREDICTED: uncharacterized protein LOC105638912 [Jatropha curcas]

Gene co-expression network

sample Hb_023675_010 Hb_023675_010 Hb_000366_100 Hb_000366_100 Hb_023675_010--Hb_000366_100 Hb_036369_010 Hb_036369_010 Hb_023675_010--Hb_036369_010 Hb_004852_020 Hb_004852_020 Hb_023675_010--Hb_004852_020 Hb_077562_040 Hb_077562_040 Hb_023675_010--Hb_077562_040 Hb_001248_020 Hb_001248_020 Hb_023675_010--Hb_001248_020 Hb_012395_100 Hb_012395_100 Hb_023675_010--Hb_012395_100 Hb_000189_530 Hb_000189_530 Hb_000366_100--Hb_000189_530 Hb_000366_100--Hb_036369_010 Hb_000752_060 Hb_000752_060 Hb_000366_100--Hb_000752_060 Hb_000617_320 Hb_000617_320 Hb_000366_100--Hb_000617_320 Hb_008016_010 Hb_008016_010 Hb_000366_100--Hb_008016_010 Hb_036369_010--Hb_001248_020 Hb_170305_020 Hb_170305_020 Hb_036369_010--Hb_170305_020 Hb_003398_060 Hb_003398_060 Hb_036369_010--Hb_003398_060 Hb_025246_010 Hb_025246_010 Hb_036369_010--Hb_025246_010 Hb_000175_520 Hb_000175_520 Hb_004852_020--Hb_000175_520 Hb_007317_220 Hb_007317_220 Hb_004852_020--Hb_007317_220 Hb_002942_030 Hb_002942_030 Hb_004852_020--Hb_002942_030 Hb_002518_250 Hb_002518_250 Hb_004852_020--Hb_002518_250 Hb_004852_020--Hb_001248_020 Hb_000184_120 Hb_000184_120 Hb_077562_040--Hb_000184_120 Hb_004025_030 Hb_004025_030 Hb_077562_040--Hb_004025_030 Hb_000563_530 Hb_000563_530 Hb_077562_040--Hb_000563_530 Hb_077562_040--Hb_000366_100 Hb_001488_110 Hb_001488_110 Hb_077562_040--Hb_001488_110 Hb_001248_020--Hb_003398_060 Hb_001248_020--Hb_025246_010 Hb_001248_020--Hb_012395_100 Hb_012395_100--Hb_000175_520 Hb_012395_100--Hb_036369_010 Hb_004545_160 Hb_004545_160 Hb_012395_100--Hb_004545_160 Hb_012395_100--Hb_004852_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
10.7605 1.24922 0.222749 0.879261 14.8402 21.7539
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
18.2756 15.1859 4.01317 1.87607 0.387493

CAGE analysis