Hb_036369_010

Information

Type -
Description -
Location Contig36369: 391-717
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_036369_010 0.0 - - -
2 Hb_001248_020 0.070078573 - - PREDICTED: uncharacterized protein At2g23090-like [Jatropha curcas]
3 Hb_000366_100 0.0884491328 - - 60S ribosomal protein L7aA [Hevea brasiliensis]
4 Hb_023675_010 0.0935405852 - - -
5 Hb_170305_020 0.0948902608 - - hypothetical protein JCGZ_23578 [Jatropha curcas]
6 Hb_003398_060 0.0984288311 - - PREDICTED: rRNA methyltransferase 2, mitochondrial isoform X1 [Jatropha curcas]
7 Hb_025246_010 0.1002481482 - - -
8 Hb_017895_050 0.1095393424 - - PREDICTED: LOW QUALITY PROTEIN: UPF0160 protein MYG1, mitochondrial [Jatropha curcas]
9 Hb_012395_100 0.1158072828 - - eukaryotic translation initiation factor 4e, putative [Ricinus communis]
10 Hb_001454_330 0.116294041 - - PREDICTED: 60S ribosomal protein L22-2-like [Jatropha curcas]
11 Hb_000617_320 0.1186727915 - - 40S ribosomal protein S21B [Hevea brasiliensis]
12 Hb_001437_040 0.1204876835 - - PREDICTED: ATPase GET3-like [Vitis vinifera]
13 Hb_003086_110 0.1237470636 - - PREDICTED: dihydroneopterin aldolase-like isoform X2 [Prunus mume]
14 Hb_003057_130 0.1244228486 - - -
15 Hb_007166_050 0.1258028219 - - -
16 Hb_004545_160 0.1274570058 - - Histidine-containing phosphotransfer protein, putative [Ricinus communis]
17 Hb_003057_050 0.1289337643 - - PREDICTED: uncharacterized protein LOC105635336 [Jatropha curcas]
18 Hb_073973_110 0.1303469681 - - PREDICTED: uncharacterized protein LOC105638912 [Jatropha curcas]
19 Hb_007625_020 0.1304211519 - - PREDICTED: casein kinase II subunit alpha-like [Sesamum indicum]
20 Hb_084934_010 0.1308497209 - - hypothetical protein JCGZ_22225 [Jatropha curcas]

Gene co-expression network

sample Hb_036369_010 Hb_036369_010 Hb_001248_020 Hb_001248_020 Hb_036369_010--Hb_001248_020 Hb_000366_100 Hb_000366_100 Hb_036369_010--Hb_000366_100 Hb_023675_010 Hb_023675_010 Hb_036369_010--Hb_023675_010 Hb_170305_020 Hb_170305_020 Hb_036369_010--Hb_170305_020 Hb_003398_060 Hb_003398_060 Hb_036369_010--Hb_003398_060 Hb_025246_010 Hb_025246_010 Hb_036369_010--Hb_025246_010 Hb_001248_020--Hb_003398_060 Hb_001248_020--Hb_025246_010 Hb_012395_100 Hb_012395_100 Hb_001248_020--Hb_012395_100 Hb_001248_020--Hb_023675_010 Hb_004852_020 Hb_004852_020 Hb_001248_020--Hb_004852_020 Hb_000189_530 Hb_000189_530 Hb_000366_100--Hb_000189_530 Hb_000366_100--Hb_023675_010 Hb_000752_060 Hb_000752_060 Hb_000366_100--Hb_000752_060 Hb_000617_320 Hb_000617_320 Hb_000366_100--Hb_000617_320 Hb_008016_010 Hb_008016_010 Hb_000366_100--Hb_008016_010 Hb_023675_010--Hb_004852_020 Hb_077562_040 Hb_077562_040 Hb_023675_010--Hb_077562_040 Hb_023675_010--Hb_012395_100 Hb_170305_020--Hb_000366_100 Hb_170305_020--Hb_000617_320 Hb_007632_250 Hb_007632_250 Hb_170305_020--Hb_007632_250 Hb_170305_020--Hb_001248_020 Hb_170305_020--Hb_012395_100 Hb_003453_010 Hb_003453_010 Hb_003398_060--Hb_003453_010 Hb_000984_190 Hb_000984_190 Hb_003398_060--Hb_000984_190 Hb_017895_050 Hb_017895_050 Hb_003398_060--Hb_017895_050 Hb_003398_060--Hb_025246_010 Hb_003057_130 Hb_003057_130 Hb_025246_010--Hb_003057_130 Hb_003057_050 Hb_003057_050 Hb_025246_010--Hb_003057_050 Hb_000699_110 Hb_000699_110 Hb_025246_010--Hb_000699_110 Hb_025246_010--Hb_000984_190
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
16.3301 2.23399 0.528801 1.19335 14.5896 22.8973
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
26.6373 22.6502 5.74736 4.96179 0.68341

CAGE analysis