Hb_002205_200

Information

Type -
Description -
Location Contig2205: 143848-146872
Sequence    

Annotation

kegg
ID rcu:RCOM_0690090
description hypothetical protein
nr
ID XP_012091139.1
description PREDICTED: uncharacterized protein LOC105649174 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JNS0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03316 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002205_200 0.0 - - PREDICTED: uncharacterized protein LOC105649174 [Jatropha curcas]
2 Hb_036285_010 0.1730145677 - - -
3 Hb_162999_010 0.2026376789 - - MULTISPECIES: hypothetical protein, partial [Pseudomonas fluorescens group]
4 Hb_174107_010 0.2270611334 - - PREDICTED: uncharacterized protein LOC105775323 [Gossypium raimondii]
5 Hb_010588_010 0.2308459274 - - -
6 Hb_030765_010 0.2312833399 desease resistance Gene Name: ABC_tran PREDICTED: ABC transporter G family member 11-like isoform X1 [Solanum lycopersicum]
7 Hb_001095_060 0.2442738636 - - Uncharacterized protein TCM_012505 [Theobroma cacao]
8 Hb_000048_100 0.2493690105 - - conserved hypothetical protein [Ricinus communis]
9 Hb_004098_030 0.2588304124 - - TMV resistance protein N, putative [Ricinus communis]
10 Hb_121550_010 0.2596114211 - - conserved hypothetical protein [Ricinus communis]
11 Hb_000931_030 0.2597844454 - - PREDICTED: uncharacterized protein LOC105130278 [Populus euphratica]
12 Hb_002153_010 0.2647387603 - - hypothetical protein B456_002G103400 [Gossypium raimondii]
13 Hb_000048_090 0.2680499198 transcription factor TF Family: SET hypothetical protein JCGZ_06559 [Jatropha curcas]
14 Hb_144101_010 0.2690575697 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance RPP13-like protein 1 [Vitis vinifera]
15 Hb_126398_010 0.2692726055 - - -
16 Hb_001186_050 0.2750507454 - - -
17 Hb_000025_100 0.2786127027 - - -
18 Hb_021888_110 0.2788980621 - - -
19 Hb_004502_050 0.2791517725 - - hypothetical protein POPTR_1488s00200g [Populus trichocarpa]
20 Hb_001488_110 0.2819051565 - - -

Gene co-expression network

sample Hb_002205_200 Hb_002205_200 Hb_036285_010 Hb_036285_010 Hb_002205_200--Hb_036285_010 Hb_162999_010 Hb_162999_010 Hb_002205_200--Hb_162999_010 Hb_174107_010 Hb_174107_010 Hb_002205_200--Hb_174107_010 Hb_010588_010 Hb_010588_010 Hb_002205_200--Hb_010588_010 Hb_030765_010 Hb_030765_010 Hb_002205_200--Hb_030765_010 Hb_001095_060 Hb_001095_060 Hb_002205_200--Hb_001095_060 Hb_036285_010--Hb_010588_010 Hb_036285_010--Hb_174107_010 Hb_166548_010 Hb_166548_010 Hb_036285_010--Hb_166548_010 Hb_001981_080 Hb_001981_080 Hb_036285_010--Hb_001981_080 Hb_021888_110 Hb_021888_110 Hb_036285_010--Hb_021888_110 Hb_000048_090 Hb_000048_090 Hb_162999_010--Hb_000048_090 Hb_002153_010 Hb_002153_010 Hb_162999_010--Hb_002153_010 Hb_126398_010 Hb_126398_010 Hb_162999_010--Hb_126398_010 Hb_001488_110 Hb_001488_110 Hb_162999_010--Hb_001488_110 Hb_162999_010--Hb_174107_010 Hb_002188_100 Hb_002188_100 Hb_162999_010--Hb_002188_100 Hb_174107_010--Hb_002153_010 Hb_004116_110 Hb_004116_110 Hb_174107_010--Hb_004116_110 Hb_174107_010--Hb_001488_110 Hb_174107_010--Hb_001095_060 Hb_001186_050 Hb_001186_050 Hb_010588_010--Hb_001186_050 Hb_002741_030 Hb_002741_030 Hb_010588_010--Hb_002741_030 Hb_168418_010 Hb_168418_010 Hb_010588_010--Hb_168418_010 Hb_010588_010--Hb_174107_010 Hb_000048_100 Hb_000048_100 Hb_030765_010--Hb_000048_100 Hb_188382_010 Hb_188382_010 Hb_030765_010--Hb_188382_010 Hb_030765_010--Hb_001186_050 Hb_000086_330 Hb_000086_330 Hb_030765_010--Hb_000086_330 Hb_000348_040 Hb_000348_040 Hb_030765_010--Hb_000348_040 Hb_000736_010 Hb_000736_010 Hb_030765_010--Hb_000736_010 Hb_121236_010 Hb_121236_010 Hb_001095_060--Hb_121236_010 Hb_115919_010 Hb_115919_010 Hb_001095_060--Hb_115919_010 Hb_027445_060 Hb_027445_060 Hb_001095_060--Hb_027445_060 Hb_068946_010 Hb_068946_010 Hb_001095_060--Hb_068946_010 Hb_061581_010 Hb_061581_010 Hb_001095_060--Hb_061581_010 Hb_001095_060--Hb_001488_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
7.62432 0 0 0 0.428048 19.003
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
13.4003 6.71034 0 0 0

CAGE analysis