Hb_036285_010

Information

Type -
Description -
Location Contig36285: 3714-6166
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_036285_010 0.0 - - -
2 Hb_002205_200 0.1730145677 - - PREDICTED: uncharacterized protein LOC105649174 [Jatropha curcas]
3 Hb_010588_010 0.1981407699 - - -
4 Hb_174107_010 0.2155246283 - - PREDICTED: uncharacterized protein LOC105775323 [Gossypium raimondii]
5 Hb_166548_010 0.2213225439 - - hypothetical protein JCGZ_09681 [Jatropha curcas]
6 Hb_001981_080 0.2219858178 - - PREDICTED: mitochondrial tRNA-specific 2-thiouridylase 1 isoform X4 [Musa acuminata subsp. malaccensis]
7 Hb_021888_110 0.2341343547 - - -
8 Hb_144101_010 0.2419627404 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance RPP13-like protein 1 [Vitis vinifera]
9 Hb_162999_010 0.2566617303 - - MULTISPECIES: hypothetical protein, partial [Pseudomonas fluorescens group]
10 Hb_007574_060 0.2634364696 transcription factor TF Family: LOB PREDICTED: LOB domain-containing protein 27-like [Jatropha curcas]
11 Hb_126398_010 0.2723939821 - - -
12 Hb_002153_010 0.2729947211 - - hypothetical protein B456_002G103400 [Gossypium raimondii]
13 Hb_001095_060 0.2743731388 - - Uncharacterized protein TCM_012505 [Theobroma cacao]
14 Hb_000931_030 0.277197484 - - PREDICTED: uncharacterized protein LOC105130278 [Populus euphratica]
15 Hb_029162_020 0.2778632379 - - -
16 Hb_001544_020 0.2782129419 - - -
17 Hb_163413_010 0.2854032899 - - PREDICTED: uncharacterized protein LOC102604542 [Solanum tuberosum]
18 Hb_121550_010 0.2877305261 - - conserved hypothetical protein [Ricinus communis]
19 Hb_048610_010 0.2923711886 - - -
20 Hb_001951_280 0.2937938593 - - -

Gene co-expression network

sample Hb_036285_010 Hb_036285_010 Hb_002205_200 Hb_002205_200 Hb_036285_010--Hb_002205_200 Hb_010588_010 Hb_010588_010 Hb_036285_010--Hb_010588_010 Hb_174107_010 Hb_174107_010 Hb_036285_010--Hb_174107_010 Hb_166548_010 Hb_166548_010 Hb_036285_010--Hb_166548_010 Hb_001981_080 Hb_001981_080 Hb_036285_010--Hb_001981_080 Hb_021888_110 Hb_021888_110 Hb_036285_010--Hb_021888_110 Hb_162999_010 Hb_162999_010 Hb_002205_200--Hb_162999_010 Hb_002205_200--Hb_174107_010 Hb_002205_200--Hb_010588_010 Hb_030765_010 Hb_030765_010 Hb_002205_200--Hb_030765_010 Hb_001095_060 Hb_001095_060 Hb_002205_200--Hb_001095_060 Hb_001186_050 Hb_001186_050 Hb_010588_010--Hb_001186_050 Hb_002741_030 Hb_002741_030 Hb_010588_010--Hb_002741_030 Hb_168418_010 Hb_168418_010 Hb_010588_010--Hb_168418_010 Hb_010588_010--Hb_174107_010 Hb_002153_010 Hb_002153_010 Hb_174107_010--Hb_002153_010 Hb_174107_010--Hb_162999_010 Hb_004116_110 Hb_004116_110 Hb_174107_010--Hb_004116_110 Hb_001488_110 Hb_001488_110 Hb_174107_010--Hb_001488_110 Hb_174107_010--Hb_001095_060 Hb_166548_010--Hb_001095_060 Hb_061581_010 Hb_061581_010 Hb_166548_010--Hb_061581_010 Hb_166548_010--Hb_021888_110 Hb_166548_010--Hb_001981_080 Hb_121236_010 Hb_121236_010 Hb_166548_010--Hb_121236_010 Hb_126398_010 Hb_126398_010 Hb_001981_080--Hb_126398_010 Hb_145827_010 Hb_145827_010 Hb_001981_080--Hb_145827_010 Hb_001544_020 Hb_001544_020 Hb_001981_080--Hb_001544_020 Hb_003702_050 Hb_003702_050 Hb_001981_080--Hb_003702_050 Hb_000003_690 Hb_000003_690 Hb_001981_080--Hb_000003_690 Hb_126112_010 Hb_126112_010 Hb_021888_110--Hb_126112_010 Hb_115919_010 Hb_115919_010 Hb_021888_110--Hb_115919_010 Hb_000025_100 Hb_000025_100 Hb_021888_110--Hb_000025_100 Hb_021888_110--Hb_001095_060 Hb_144101_010 Hb_144101_010 Hb_021888_110--Hb_144101_010 Hb_021888_110--Hb_121236_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.218292 0 0 0 0 0.635611
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.198325 0.311558 0 0 0

CAGE analysis